Metabolic reprogramming in colon cancer (WP4290)

Homo sapiens

Metabolic reprogramming in colon cancer. This pathway was created from a figure by Vasaikar S and Zhang B, Baylor College of Medicine, June 2018.

Authors

Kristina Hanspers , Egon Willighagen , and Alex Pico

Activity

last edited

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Cited In

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Organisms

Homo sapiens

Communities

CPTAC Diseases

Annotations

Pathway Ontology

altered carbohydrate metabolic pathway cancer pathway

Disease Ontology

colorectal cancer

Participants

Label Type Compact URI Comment
NH3 Metabolite chebi:16134
Phosphoserine Metabolite chebi:45522
IC Metabolite chebi:16087
glucose Metabolite chebi:17234
lipids Metabolite chebi:18059
IMP Metabolite chebi:17202
glutamate Metabolite chebi:14321
KG Metabolite chebi:16810
3PHP Metabolite chebi:18110
Asparagine Metabolite chebi:17196
G6P Metabolite chebi:4170
F6P Metabolite chebi:16084
G3P Metabolite hmdb:HMDB0001112
F1,6P Metabolite hmdb:HMDB0001058
2PG Metabolite hmdb:HMDB0000362
1,3BPG Metabolite hmdb:HMDB0001270
3PG Metabolite hmdb:HMDB0000807
Lactate Metabolite hmdb:HMDB0000190
Pyruvate Metabolite hmdb:HMDB0000243
PEP Metabolite hmdb:HMDB0000263
Acetyl-CoA Metabolite hmdb:HMDB0001206
Malate Metabolite hmdb:HMDB0000744
OAA Metabolite hmdb:HMDB0000223
citrate Metabolite hmdb:HMDB0000094
fumarate Metabolite hmdb:HMDB0000134
S-CoA Metabolite hmdb:HMDB0001022 The ChEBI ID with the correct charge is: 57292
serine Metabolite chebi:17822
glycine Metabolite chebi:15428
S7P Metabolite cas:2646-35-7
R5P Metabolite cas:3615-55-2
6PGA Metabolite hmdb:HMDB0001316
E4P Metabolite hmdb:HMDB0001321
Ri5P Metabolite cas:4151-19-3
glutamine Metabolite chebi:28300
Glutathione Metabolite chebi:16856
ROS Metabolite wikidata:Q424361
Proline Metabolite chebi:26271
GOT2 GeneProduct ensembl:ENSG00000125166
PPAT GeneProduct ensembl:ENSG00000128059
PSAT1 GeneProduct ensembl:ENSG00000135069
GLUD1 GeneProduct ensembl:ENSG00000148672
G6PD GeneProduct ensembl:ENSG00000160211
GLS GeneProduct ensembl:ENSG00000115419
SLC1A5 GeneProduct ensembl:ENSG00000105281
PYCR1 GeneProduct ensembl:ENSG00000183010
HK3 GeneProduct ensembl:ENSG00000160883
GPI GeneProduct ensembl:ENSG00000105220
TIGAR GeneProduct ensembl:ENSG00000078237
PFKL GeneProduct ensembl:ENSG00000141959
GAPDH GeneProduct ensembl:ENSG00000111640
ALDOB GeneProduct ensembl:ENSG00000136872
PGK1 GeneProduct ensembl:ENSG00000102144
PGAM1 GeneProduct ensembl:ENSG00000171314
LDHA GeneProduct ensembl:ENSG00000134333
ENO1 GeneProduct ensembl:ENSG00000074800
PKM GeneProduct ensembl:ENSG00000067225
SLC16A3 GeneProduct ensembl:ENSG00000141526
PDHA1 GeneProduct ensembl:ENSG00000131828
PDHB GeneProduct ensembl:ENSG00000168291
ACO2 GeneProduct ensembl:ENSG00000100412
SUCLG2 GeneProduct ensembl:ENSG00000172340
DLST GeneProduct ensembl:ENSG00000119689
IDH2 GeneProduct ensembl:ENSG00000182054
FH GeneProduct ensembl:ENSG00000091483
MDH2 GeneProduct ensembl:ENSG00000146701
SDHB GeneProduct ensembl:ENSG00000117118
IDH3A GeneProduct ensembl:ENSG00000166411
ACLY GeneProduct ensembl:ENSG00000131473
FASN GeneProduct ensembl:ENSG00000169710
PSPH GeneProduct ensembl:ENSG00000146733
SHMT2 GeneProduct ensembl:ENSG00000182199
PAICS GeneProduct ensembl:ENSG00000128050
GART GeneProduct ensembl:ENSG00000159131
TALDO1 GeneProduct ensembl:ENSG00000177156
RPIA GeneProduct ensembl:ENSG00000153574
TKT GeneProduct ensembl:ENSG00000163931
PGD GeneProduct ensembl:ENSG00000142657
PYCR2 GeneProduct ensembl:ENSG00000143811
SLC2A1 GeneProduct ensembl:ENSG00000117394

References

  1. Urinary organic acids in man. I. Normal patterns. Lawson AM, Chalmers RA, Watts RW. Clin Chem. 1976 Aug;22(8):1283–7. PubMed Europe PMC Scholia
  2. Citrate synthesis in intact rat-liver mitochondria is irreversible. Greksák M, Lopes-Cardozo M, van den Bergh SG. Eur J Biochem. 1982 Feb;122(2):423–7. PubMed Europe PMC Scholia
  3. Isotopomer analysis of citric acid cycle and gluconeogenesis in rat liver. Reversibility of isocitrate dehydrogenase and involvement of ATP-citrate lyase in gluconeogenesis. Des Rosiers C, Di Donato L, Comte B, Laplante A, Marcoux C, David F, et al. J Biol Chem. 1995 Apr 28;270(17):10027–36. PubMed Europe PMC Scholia
  4. Modeling of liver citric acid cycle and gluconeogenesis based on 13C mass isotopomer distribution analysis of intermediates. Fernandez CA, Des Rosiers C. J Biol Chem. 1995 Apr 28;270(17):10037–42. PubMed Europe PMC Scholia
  5. Characterization of the ATP- and GTP-specific succinyl-CoA synthetases in pigeon. The enzymes incorporate the same alpha-subunit. Johnson JD, Muhonen WW, Lambeth DO. J Biol Chem. 1998 Oct 16;273(42):27573–9. PubMed Europe PMC Scholia
  6. The alpha-ketoglutarate dehydrogenase complex. Sheu KF, Blass JP. Ann N Y Acad Sci. 1999;893:61–78. PubMed Europe PMC Scholia
  7. The conversion of citrate into cis-aconitate and isocitrate in the presence of aconitase. KREBS HA, HOLZACH O. Biochem J. 1952 Nov;52(3):527–8. PubMed Europe PMC Scholia