Electron transport chain: OXPHOS system in mitochondria (WP111)
Homo sapiens
An electron transport chain(ETC) couples a chemical reaction between an electron donor (such as NADH) and an electron acceptor (such as O2) to the transfer of H+ ions across a membrane, through a set of mediating biochemical reactions. These H+ ions are used to produce adenosine triphosphate (ATP), the main energy intermediate in living organisms, as they move back across the membrane. In mitochondria, it is the conversion of oxygen to water, NADH to NAD+ and succinate to fumarate that drives the transfer of H+ ions. Source: Wikipedia ([[wikipedia:Electron_transport_chain]]) Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP111 CPTAC Assay Portal]
Authors
Kdahlquist , Alex Pico , Kristina Hanspers , Ferry Jagers , Christine Chichester , Egon Willighagen , Martina Summer-Kutmon , Denise Slenter , Eric Weitz , and Aishwarya IyerActivity
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Cited In
- The Human Cell Atlas bone marrow single-cell interactive web portal.
- A Pilot Mitochondrial Genome-Wide Association on Migraine Among Saudi Arabians (2022).
- Network-Assisted Systems Biology Analysis of the Mitochondrial Proteome in a Pre-Clinical Model of Ischemia, Revascularization and Post-Conditioning (2022).
- DNA methylation of ARHGAP30 is negatively associated with ARHGAP30 expression in lung adenocarcinoma, which reduces tumor immunity and is detrimental to patient survival (2021).
- ConsensusPathDB 2022: molecular interactions update as a resource for network biology (2022).
- Extensive alternative splicing triggered by mitonuclear mismatch in naturally introgressed Rhinolophus bats (2021).
- Reduced mGluR5 Activity Modulates Mitochondrial Function (2021).
- Heterogeneity of Lipid and Protein Cartilage Profiles Associated with Human Osteoarthritis with or without Type 2 Diabetes Mellitus (2021).
- WikiPathways: connecting communities (2021).
- Skeletal muscle reprogramming by breast cancer regardless of treatment history or tumor molecular subtype (2020).
- Phenotypic and functional characterization of corneal endothelial cells during in vitro expansion (2020).
- Granule Cell Dispersion in Human Temporal Lobe Epilepsy: Proteomics Investigation of Neurodevelopmental Migratory Pathways (2020).
- Mitochondrial Oxidative Phosphorylation Complex Regulates NLRP3 Inflammasome Activation and Predicts Patient Survival in Nasopharyngeal Carcinoma* (2020).
- Pathway analysis of transcriptomic data shows immunometabolic effects of vitamin D (2018).
- Pre-silencing of genes involved in the electron transport chain (ETC) pathway is associated with responsiveness to abatacept in rheumatoid arthritis (2017).
- RNA-Seq analysis of seasonal and individual variation in blood transcriptomes of healthy managed bottlenose dolphins (2016).
- Clinical improvement of DM1 patients reflected by reversal of disease-induced gene expression in blood (2022).
- A patient-based iPSC-derived hepatocyte model of alcohol-associated cirrhosis reveals bioenergetic insights into disease pathogenesis (2024).
- Integrative epigenetic profiling analysis identifies DNA methylation changes associated with chronic alcohol consumption (2015).
- Parallel use of human stem cell lung and heart models provide insights for SARS-CoV-2 treatment (2023).
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Organisms
Homo sapiensCommunities
Serious Request 2024 - MetaKidsAnnotations
Pathway Ontology
electron transport chain pathway classic metabolic pathwayLabel | Type | Compact URI | Comment |
---|---|---|---|
O2 | Metabolite | hmdb:HMDB0001377 | |
H+ | Metabolite | chebi:15378 | |
ATP | Metabolite | kegg.compound:C00002 | |
Succinate | Metabolite | kegg.compound:C00042 | |
e- | Metabolite | kegg.compound:C05359 | |
FADH2 | Metabolite | kegg.compound:C01352 | |
FAD | Metabolite | kegg.compound:C00016 | |
NAD+ | Metabolite | kegg.compound:C00003 | |
H2O | Metabolite | hmdb:HMDB0002111 | |
Cytochrome C | Metabolite | kegg.compound:C00524 | |
NADH | Metabolite | kegg.compound:C00004 | |
Ubiquinone | Metabolite | hmdb:HMDB0002012 | |
ATP5A1 | GeneProduct | ncbigene:498 | |
NDUFB6 | GeneProduct | ncbigene:4712 | |
ATP5I | GeneProduct | ncbigene:521 | |
SLC25A5 | GeneProduct | ncbigene:292 | |
COX15 | GeneProduct | ncbigene:1355 | |
COX6B1 | GeneProduct | ncbigene:1340 | |
UCRC | GeneProduct | ncbigene:29796 | |
COX6C | GeneProduct | ncbigene:1345 | |
ATP5J2 | GeneProduct | ncbigene:9551 | |
ATP5O | GeneProduct | ncbigene:539 | |
ATP5G2 | GeneProduct | ncbigene:517 | |
NDUFC1 | GeneProduct | ncbigene:4717 | |
ATP5B | GeneProduct | ncbigene:506 | |
NDUFA8 | GeneProduct | ncbigene:4702 | |
UQCR | GeneProduct | ncbigene:10975 | |
NDUFA3 | GeneProduct | ncbigene:4696 | |
SLC25A14 | GeneProduct | ncbigene:9016 | |
NDUFV2 | GeneProduct | ncbigene:4729 | |
NDUFA6 | GeneProduct | ncbigene:4700 | |
COX2 | GeneProduct | ncbigene:4513 | |
NDUFB9 | GeneProduct | ncbigene:4715 | |
NDUFS6 | GeneProduct | ncbigene:4726 | |
UQCRFS1 | GeneProduct | ncbigene:7386 | |
NDUFA2 | GeneProduct | ncbigene:4695 | |
ND4L | GeneProduct | ncbigene:4539 | |
ATP8 | GeneProduct | ncbigene:4509 | |
NDUFS5 | GeneProduct | ncbigene:4725 | |
COX5A | GeneProduct | ncbigene:9377 | |
UQCRC2 | GeneProduct | ncbigene:7385 | |
COX11 | GeneProduct | ncbigene:1353 | |
ATP5J | GeneProduct | ncbigene:522 | |
SDHB | GeneProduct | ncbigene:6390 | |
COX1 | GeneProduct | ncbigene:4512 | |
COX7A2L | GeneProduct | ncbigene:9167 | |
NDUFS7 | GeneProduct | ncbigene:374291 | |
COX6A1 | GeneProduct | ncbigene:1337 | |
SLC25A27 | GeneProduct | ncbigene:9481 | |
NDUFS4 | GeneProduct | ncbigene:4724 | |
COX7A1 | GeneProduct | ncbigene:1346 | |
COX4I1 | GeneProduct | ncbigene:1327 | |
COX7A3 | GeneProduct | uniprot:O60397 | |
SLC25A6 | GeneProduct | ncbigene:293 | |
ATP5L | GeneProduct | ncbigene:10632 | |
NDUFB1 | GeneProduct | ncbigene:4707 | |
UCP3 | GeneProduct | ncbigene:7352 | |
UQCRH | GeneProduct | ncbigene:7388 | |
NDUFA9 | GeneProduct | ncbigene:4704 | |
NDUFB3 | GeneProduct | ncbigene:4709 | |
ATP5G1 | GeneProduct | ncbigene:516 | |
NDUFB4 | GeneProduct | ncbigene:4710 | |
COX7A2 | GeneProduct | ncbigene:1347 | |
ND6 | GeneProduct | ncbigene:4541 | |
ATP5S | GeneProduct | ncbigene:27109 | |
SDHA | GeneProduct | ncbigene:6389 | |
ND2 | GeneProduct | ncbigene:4536 | |
NDUFAB1 | GeneProduct | ncbigene:4706 | |
COX7B | GeneProduct | ncbigene:1349 | |
QP-C | GeneProduct | ncbigene:27089 | |
SLC25A4 | GeneProduct | ncbigene:291 | |
UQCRB | GeneProduct | ncbigene:7381 | |
ND5 | GeneProduct | ncbigene:4540 | |
DAP13 | GeneProduct | ncbigene:55967 | |
SCO1 | GeneProduct | ncbigene:6341 | |
SDHD | GeneProduct | ncbigene:6392 | |
ATPIF1 | GeneProduct | ncbigene:93974 | |
NDUFB7 | GeneProduct | ncbigene:4713 | |
NDUFA1 | GeneProduct | ncbigene:4694 | |
UQCRC1 | GeneProduct | ncbigene:7384 | |
NDUFB5 | GeneProduct | ncbigene:4711 | |
COX5B | GeneProduct | ncbigene:1329 | |
ATP6 | GeneProduct | ncbigene:4508 | |
COX3 | GeneProduct | ncbigene:4514 | |
NDUFS3 | GeneProduct | ncbigene:4722 | |
COX8A | GeneProduct | ncbigene:1351 | |
ND1 | GeneProduct | ncbigene:4535 | |
NDUFV1 | GeneProduct | ncbigene:4723 | |
SDHC | GeneProduct | ncbigene:6391 | |
ATP5G3 | GeneProduct | ncbigene:518 | |
COX6A2 | GeneProduct | ncbigene:1339 | |
SURF1 | GeneProduct | ncbigene:6834 | |
NDUFS1 | GeneProduct | ncbigene:4719 | |
NDUFA7 | GeneProduct | ncbigene:4701 | |
ND4 | GeneProduct | ncbigene:4538 | |
ATP5H | GeneProduct | ncbigene:10476 | |
NDUFC2 | GeneProduct | ncbigene:4718 | |
NDUFB2 | GeneProduct | ncbigene:4708 | |
NDUFS2 | GeneProduct | ncbigene:4720 | |
COX7C | GeneProduct | ncbigene:1350 | |
ATP5D | GeneProduct | ncbigene:513 | |
NDUFB10 | GeneProduct | ncbigene:4716 | |
COX17 | GeneProduct | ncbigene:10063 | |
NDUFA4 | GeneProduct | ncbigene:4697 | |
NDUFA5 | GeneProduct | ncbigene:4698 | |
ATP5F1 | GeneProduct | ncbigene:515 | |
ATP5E | GeneProduct | ncbigene:514 | |
ATP5C1 | GeneProduct | ncbigene:509 | |
NDUFV3 | GeneProduct | ncbigene:4731 | |
NDUFA10 | GeneProduct | ncbigene:4705 | |
UCP2 | GeneProduct | ncbigene:7351 | |
ND3 | GeneProduct | ncbigene:4537 | |
NDUFS8 | GeneProduct | ncbigene:4728 | |
NDUFB8 | GeneProduct | ncbigene:4714 | |
CYTB | GeneProduct | ncbigene:4519 | |
UCP1 | GeneProduct | ncbigene:7350 | |
NDUFA11 | GeneProduct | ncbigene:126328 | |
NDUFA13 | GeneProduct | hgnc.symbol:NDUFA13 |
References
- NDUFA4 is a subunit of complex IV of the mammalian electron transport chain. Balsa E, Marco R, Perales-Clemente E, Szklarczyk R, Calvo E, Landázuri MO, et al. Cell Metab. 2012 Sep 5;16(3):378–86. PubMed Europe PMC Scholia
- NDUFA4 mutations underlie dysfunction of a cytochrome c oxidase subunit linked to human neurological disease. Pitceathly RDS, Rahman S, Wedatilake Y, Polke JM, Cirak S, Foley AR, et al. Cell Rep. 2013 Jun 27;3(6):1795–805. PubMed Europe PMC Scholia
- Assembly of mammalian oxidative phosphorylation complexes I-V and supercomplexes. Signes A, Fernandez-Vizarra E. Essays Biochem. 2018 Jul 20;62(3):255–70. PubMed Europe PMC Scholia