Biotic stress response gene network (WP4364)
Oryza sativa
Biotic stress response gene-network in rice
Authors
Sushma Naithani , Martina Summer-Kutmon , Denise Slenter , Alex Pico , Eric Weitz , and Egon WillighagenActivity
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Organisms
Oryza sativaCommunities
Annotations
Pathway Ontology
stress response pathway signaling pathway| Label | Type | Compact URI | Comment |
|---|---|---|---|
| GIP-9 | GeneProduct | :Os03g0736000 | |
| SnRK1A | GeneProduct | :Os05g0530500|mRNA|AF062479|CDS+3'UTR | |
| OsWRKY62 | GeneProduct | :Os09g0417800 | WRKY Family transcription factor 62 involved in biotic stress response and in NAC10 mediated abiotic stress response |
| OsMKK4 | Protein | :Os02g0787300|mRNA|AK120525|CDS+3'UTR | |
| XB12 | Protein | :Os10g0577700|mRNA|AK061718|CDS+3'UTR | |
| OsMPK1 | Protein | :Os06g0154500|mRNA|AB183398|CDS+3'UTR | |
| OsWRKY71 | Protein | :Os02g0181300|mRNA|AK058773|CDS+3'UTR | |
| GIP-1 | Protein | :Os03g0786100 | |
| XB21 | Protein | :Os12g0548200|mRNA|AK072993|CDS+3'UTR | |
| Os01g0250900 | Protein | :Os01g0250900|mRNA|AK065179|CDS+3'UTR | |
| OsMPK5 | Protein | :Os03g0285800|mRNA|AF216315|CDS+3'UTR | |
| GRNL2 | Protein | :Os05g0563900|mRNA|AK062897|UTR | |
| NRRH2 | Protein | :Os01g0508500|mRNA|AK120501|CDS+3'UTR | |
| SGT1 | Protein | :Os08g0447200|mRNA|AK067377|CDS+3'UTR | |
| OsMPK8 | Protein | :Os01g0665200|mRNA|AJ512643|CDS+3'UTR | |
| XB2 | Protein | :Os06g0283200|mRNA|AK073829|CDS+3'UTR | |
| GRNL1 | Protein | :Os1g0667900 | |
| GIP-23 | Protein | :Os10g0537300 | |
| rTGA2.1 | Protein | :Os07g0687700 | |
| TGA2.2 | Protein | :Os03g0318600 | |
| GIP-20 | Protein | :Os08g0562200 | |
| GIP-6 | Protein | :Os04g0471400 | |
| GIP-18 | Protein | :Os09g0115500 | |
| GIP-11 | Protein | :Os02g0782200 | |
| NH1 | Protein | :Os01g0194300|mRNA|AK120715|CDS+3'UTR | |
| NRRH3 | Protein | :Os01g0508100|COMBINER_EST|CI557510|0 | |
| NRR | Protein | :Os01g0130200|COMBINER|CI449644|6 | |
| NRRIP-3 | Protein | :Os11g0139500|mRNA|AK103113|CDS+3'UTR | |
| NRRH1 | Protein | :Os05g0368000|COMBINER_EST|Os05g0368000|8 | |
| TGA2.3 | Protein | :Os01g0279900|mRNA|AB051296|CDS+3'UTR | |
| rLG2 | Protein | :Os01g0859500|mRNA|AK101338|CDS+3'UTR | |
| NRRIP-1 | Protein | :O | |
| TGA2.1IP-2 | Protein | :Os12g0573200|mRNA|AK111522|CDS+3'UTR | |
| TGA2.1IP-1 | Protein | :Os07g0585000|mRNA|AK071269|CDS+3'UTR | |
| NH2 | Protein | :Os01g0767900 | |
| NRRIP-2 | Protein | :Os07g0508300|mRNA|AK063908|CDS+3'UTR | |
| XB2IP-1 | Protein | :Os06g0681400|mRNA|AK121590|CDS+3'UTR | |
| XB2IP-2 | Protein | :Os04g0648500|mRNA|AK064227|CDS+3'UTR | |
| XB2-IP-3 | Protein | :Os09g0133800|mRNA|AK060425|CDS+3'UTR | |
| XB2IP-4 | Protein | :Os02g0148300|mRNA|AK071342|CDS+3'UTR | |
| XA21 | Protein | :Os11g0569733 | |
| XB3 | Protein | :Os05g0112000|mRNA|AF272860|CDS | |
| Os02g0817000 | Protein | :Os02g0817000 | |
| OsWRKY28 | Protein | :Os06g0649000|mRNA|AK106282|CDS+3'UTR | |
| XB11 | Protein | :Os01g0128800 | |
| XB11IP-1 | Protein | :Os11g0568700|mRNA|AK099671|CDS+3'UTR | |
| PBZ1IP-1 | Protein | :Os03g0183800|mRNA|AK100621|CDS+3'UTR | |
| XB15 | Protein | :Os03g0821300|mRNA|AJ575237|5'UTR+CDS | |
| PBZ1 | Protein | :Os12g0555500|mRNA|AK071613|CDS+3'UTR | |
| XB11IP-2 | Protein | :Os08g0151700|mRNA|AK073149|CDS+3'UTR | |
| PBZ1IP-2 | Protein | :Os03g0655400|mRNA|AB011368|CDS+3'UTR | |
| XB22 | Protein | :Os07g0171100|mRNA|AF272978|CDS+3'UTR | |
| OsRBOHB | Protein | :Os01g0360200|mRNA|AK060770|CDS+3'UTR | |
| OSRac1 | Protein | :Os01g0229400|mRNA|AB029508|CDS+3'UTR | OsRac1 Expresses in seed and a key component of rice defense and submergence tolerance signaling pathway. 3: WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks.; Hanumappa M; Preece J; Elser J; Nemeth D; Bono G; Wu K; Jaiswal P; Rice (N Y); 2013; PubMed 19: Towards establishment of a rice stress response interactome.; Seo YS; Chern M; Bartley LE; Han M; Jung KH; Lee I; Walia H; Richter T; Xu X; Cao P; Bai W; Ramanan R; Amonpant F; Arul L; Canlas PE; Ruan R; Park CJ; Chen X; Hwang S; Jeon JS; Ronald PC; PLoS Genet; 2011; PubMed |
| RAR1 | Protein | :Os02g0535400|mRNA|AK111881|CDS+3'UTR | |
| OSMPK12 | Protein | :Os06g0708000|mRNA|AF177392|CDS+3'UTR | |
| OSEREBP1 | Protein | :Os02g0782700|mRNA|AF193803|CDS+3'UTR | |
| XB22IP-1 | Protein | :Os11g0106900|COMBINER_EST|CI445507|0 | |
| HSP90 | Protein | :Os09g0482100|mRNA|AB111810|CDS+3'UTR | |
| OsWRKY67 | Protein | :Os05g0183100|mRNA|AK066252|CDS+3'UTR | |
| RACK1A | Protein | :Os01g0686800 | Guanine nucleotide-binding protein subunit beta-like protein A (RACK1A) Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways |
| XB24 | Protein | :Os01g0771200 | XB24, ATPase Expresses in seed and is involved in XA21 mediated immunity and subergemce tolerance in rice pathways |
| GIP13 | Protein | :Os02g0306401 | GIP13, Nicotinanamine aminotransferase Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways |
References
- Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions. Jeong JS, Kim YS, Baek KH, Jung H, Ha SH, Do Choi Y, et al. Plant Physiol. 2010 May;153(1):185–97. PubMed Europe PMC Scholia
- Towards establishment of a rice stress response interactome. Seo YS, Chern M, Bartley LE, Han M, Jung KH, Lee I, et al. PLoS Genet. 2011 Apr;7(4):e1002020. PubMed Europe PMC Scholia
- WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks. Hanumappa M, Preece J, Elser J, Nemeth D, Bono G, Wu K, et al. Rice (N Y). 2013 May 29;6(1):14. PubMed Europe PMC Scholia