Biotic stress response gene network

Sushma Naithani; Martina Summer-Kutmon; Denise Slenter; Alex Pico; Eric Weitz; Egon Willighagen

Biotic stress response gene network (WP4364)

Oryza sativa

Biotic stress response gene-network in rice

Authors

Sushma Naithani , Martina Summer-Kutmon , Denise Slenter , Alex Pico , Eric Weitz , and Egon Willighagen

Activity

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Cited In

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Organisms

Oryza sativa

Communities

Annotations

Pathway Ontology

stress response pathway signaling pathway

Participants

Label	Type	Compact URI	Comment
GIP-9	GeneProduct	:Os03g0736000
SnRK1A	GeneProduct	:Os05g0530500\|mRNA\|AF062479\|CDS+3'UTR
OsWRKY62	GeneProduct	:Os09g0417800	WRKY Family transcription factor 62 involved in biotic stress response and in NAC10 mediated abiotic stress response
OsMKK4	Protein	:Os02g0787300\|mRNA\|AK120525\|CDS+3'UTR
XB12	Protein	:Os10g0577700\|mRNA\|AK061718\|CDS+3'UTR
OsMPK1	Protein	:Os06g0154500\|mRNA\|AB183398\|CDS+3'UTR
OsWRKY71	Protein	:Os02g0181300\|mRNA\|AK058773\|CDS+3'UTR
GIP-1	Protein	:Os03g0786100
XB21	Protein	:Os12g0548200\|mRNA\|AK072993\|CDS+3'UTR
Os01g0250900	Protein	:Os01g0250900\|mRNA\|AK065179\|CDS+3'UTR
OsMPK5	Protein	:Os03g0285800\|mRNA\|AF216315\|CDS+3'UTR
GRNL2	Protein	:Os05g0563900\|mRNA\|AK062897\|UTR
NRRH2	Protein	:Os01g0508500\|mRNA\|AK120501\|CDS+3'UTR
SGT1	Protein	:Os08g0447200\|mRNA\|AK067377\|CDS+3'UTR
OsMPK8	Protein	:Os01g0665200\|mRNA\|AJ512643\|CDS+3'UTR
XB2	Protein	:Os06g0283200\|mRNA\|AK073829\|CDS+3'UTR
GRNL1	Protein	:Os1g0667900
GIP-23	Protein	:Os10g0537300
rTGA2.1	Protein	:Os07g0687700
TGA2.2	Protein	:Os03g0318600
GIP-20	Protein	:Os08g0562200
GIP-6	Protein	:Os04g0471400
GIP-18	Protein	:Os09g0115500
GIP-11	Protein	:Os02g0782200
NH1	Protein	:Os01g0194300\|mRNA\|AK120715\|CDS+3'UTR
NRRH3	Protein	:Os01g0508100\|COMBINER_EST\|CI557510\|0
NRR	Protein	:Os01g0130200\|COMBINER\|CI449644\|6
NRRIP-3	Protein	:Os11g0139500\|mRNA\|AK103113\|CDS+3'UTR
NRRH1	Protein	:Os05g0368000\|COMBINER_EST\|Os05g0368000\|8
TGA2.3	Protein	:Os01g0279900\|mRNA\|AB051296\|CDS+3'UTR
rLG2	Protein	:Os01g0859500\|mRNA\|AK101338\|CDS+3'UTR
NRRIP-1	Protein	:O
TGA2.1IP-2	Protein	:Os12g0573200\|mRNA\|AK111522\|CDS+3'UTR
TGA2.1IP-1	Protein	:Os07g0585000\|mRNA\|AK071269\|CDS+3'UTR
NH2	Protein	:Os01g0767900
NRRIP-2	Protein	:Os07g0508300\|mRNA\|AK063908\|CDS+3'UTR
XB2IP-1	Protein	:Os06g0681400\|mRNA\|AK121590\|CDS+3'UTR
XB2IP-2	Protein	:Os04g0648500\|mRNA\|AK064227\|CDS+3'UTR
XB2-IP-3	Protein	:Os09g0133800\|mRNA\|AK060425\|CDS+3'UTR
XB2IP-4	Protein	:Os02g0148300\|mRNA\|AK071342\|CDS+3'UTR
XA21	Protein	:Os11g0569733
XB3	Protein	:Os05g0112000\|mRNA\|AF272860\|CDS
Os02g0817000	Protein	:Os02g0817000
OsWRKY28	Protein	:Os06g0649000\|mRNA\|AK106282\|CDS+3'UTR
XB11	Protein	:Os01g0128800
XB11IP-1	Protein	:Os11g0568700\|mRNA\|AK099671\|CDS+3'UTR
PBZ1IP-1	Protein	:Os03g0183800\|mRNA\|AK100621\|CDS+3'UTR
XB15	Protein	:Os03g0821300\|mRNA\|AJ575237\|5'UTR+CDS
PBZ1	Protein	:Os12g0555500\|mRNA\|AK071613\|CDS+3'UTR
XB11IP-2	Protein	:Os08g0151700\|mRNA\|AK073149\|CDS+3'UTR
PBZ1IP-2	Protein	:Os03g0655400\|mRNA\|AB011368\|CDS+3'UTR
XB22	Protein	:Os07g0171100\|mRNA\|AF272978\|CDS+3'UTR
OsRBOHB	Protein	:Os01g0360200\|mRNA\|AK060770\|CDS+3'UTR
OSRac1	Protein	:Os01g0229400\|mRNA\|AB029508\|CDS+3'UTR	OsRac1 Expresses in seed and a key component of rice defense and submergence tolerance signaling pathway. 3: WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks.; Hanumappa M; Preece J; Elser J; Nemeth D; Bono G; Wu K; Jaiswal P; Rice (N Y); 2013; PubMed 19: Towards establishment of a rice stress response interactome.; Seo YS; Chern M; Bartley LE; Han M; Jung KH; Lee I; Walia H; Richter T; Xu X; Cao P; Bai W; Ramanan R; Amonpant F; Arul L; Canlas PE; Ruan R; Park CJ; Chen X; Hwang S; Jeon JS; Ronald PC; PLoS Genet; 2011; PubMed
RAR1	Protein	:Os02g0535400\|mRNA\|AK111881\|CDS+3'UTR
OSMPK12	Protein	:Os06g0708000\|mRNA\|AF177392\|CDS+3'UTR
OSEREBP1	Protein	:Os02g0782700\|mRNA\|AF193803\|CDS+3'UTR
XB22IP-1	Protein	:Os11g0106900\|COMBINER_EST\|CI445507\|0
HSP90	Protein	:Os09g0482100\|mRNA\|AB111810\|CDS+3'UTR
OsWRKY67	Protein	:Os05g0183100\|mRNA\|AK066252\|CDS+3'UTR
RACK1A	Protein	:Os01g0686800	Guanine nucleotide-binding protein subunit beta-like protein A (RACK1A) Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways
XB24	Protein	:Os01g0771200	XB24, ATPase Expresses in seed and is involved in XA21 mediated immunity and subergemce tolerance in rice pathways
GIP13	Protein	:Os02g0306401	GIP13, Nicotinanamine aminotransferase Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways

References

Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions. Jeong JS, Kim YS, Baek KH, Jung H, Ha SH, Do Choi Y, et al. Plant Physiol. 2010 May;153(1):185–97. PubMed Europe PMC Scholia
Towards establishment of a rice stress response interactome. Seo YS, Chern M, Bartley LE, Han M, Jung KH, Lee I, et al. PLoS Genet. 2011 Apr;7(4):e1002020. PubMed Europe PMC Scholia
WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks. Hanumappa M, Preece J, Elser J, Nemeth D, Bono G, Wu K, et al. Rice (N Y). 2013 May 29;6(1):14. PubMed Europe PMC Scholia