Flowering time pathway (WP4339)

Brassica napus

This pathway shows the molecular pathway underlying flowering in rapeseed (Brassica napus).

Authors

Alex Pico , Friederike Ehrhart , Eric Weitz , and Egon Willighagen

Activity

last edited

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Cited In

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Organisms

Communities

Annotations

Pathway Ontology

signaling pathway

Participants

Label Type Compact URI Comment
A02 GeneProduct :BnaA02g35830D Bna.AP1.A2
C02 GeneProduct :BnaC02g44500D Bna.AP1.C2
A07a GeneProduct :BnaA07g24360D Bna.AP1.A2
A07b GeneProduct :BnaA07g27710D Bna.AP1.A2
C06a GeneProduct :BnaC06g25500D Bna.AP1.A2
C06b GeneProduct :BnaC06g29980D Bna.AP1.A2
A01 GeneProduct uniprot:BnaA01g12700D Bna.AP1.A2
A03 GeneProduct :BnaA03g53830D Bna.AP1.C2
C01 GeneProduct :BnaC01g01710D Bna.AP1.A2
Cna GeneProduct :BnaCnng39690D Bna.AP1.A2
Cnb GeneProduct :BnaCnng71740D Bna.AP1.A2
A01a GeneProduct :BnaA01g12700D Bna.AP1.A2
C01a GeneProduct :BnaC01g14430D Bna.AP1.A2
A01b GeneProduct :BnaA01g12710D Bna.AP1.A2
C01b GeneProduct :BnaC01g14440D Bna.AP1.A2
A03 GeneProduct :BnaA03g45650D Bna.AP1.A2
C07 GeneProduct :BnaC07g37750D Bna.AP1.A2
A08 GeneProduct :BnaA08g10540D Bna.AP1.A2
Cn GeneProduct :BnaCnng29230D Bna.AP1.A2
A06 GeneProduct :BnaA06g39070D Bna.AP1.A2
Cna GeneProduct :BnaCnng24550D Bna.AP1.A2
Cnb GeneProduct :BnaCnng78420D Bna.AP1.A2
Cnc GeneProduct :BnaCnng78500D Bna.AP1.A2
A03 GeneProduct :BnaA03g56880D Bna.AP1.A2
A04 GeneProduct :BnaA04g26320D Bna.AP1.A2
A05 GeneProduct :BnaA05g05010D Bna.AP1.A2
C04a GeneProduct :BnaC04g50370D Bna.AP1.A2
C04b GeneProduct :BnaC04g53290D Bna.AP1.A2
Cn GeneProduct :BnaCnng36880D Bna.AP1.A2
A01 GeneProduct :BnaA01g01640D Bna.AP1.A2
C01 GeneProduct :BnaC01g02720D Bna.AP1.A2
An GeneProduct :BnaAnng08290D Bna.AP1.A2
C07 GeneProduct :BnaC07g45850D Bna.AP1.A2
A08 GeneProduct :BnaA08g14840D Bna.AP1.A2
C03 GeneProduct :BnaC03g76870D Bna.AP1.A2
An GeneProduct :BnaAnng00810D Bna.AP1.A2
A10 GeneProduct :BnaA10g26300D Bna.AP1.A2
Cn GeneProduct :BnaCnng10680D Bna.AP1.A2
C02 GeneProduct :BnaC02g02900D Bna.AP1.A2
C01a GeneProduct :BnaC01g16370D Bna.AP1.A2
A01 GeneProduct :BnaA01g13920D Bna.AP1.A2
C01b GeneProduct :BnaC01g16360D Bna.AP1.A2
A03 GeneProduct :BnaA03g46780D Bna.AP1.A2
C07 GeneProduct :BnaC07g38990D Bna.AP1.A2
A04 GeneProduct :BnaA04g12990D Bna.AP1.A2
A09 GeneProduct :BnaA09g42480D Bna.AP1.A2
C04 GeneProduct :BnaC04g35060D Bna.AP1.A2
C08 GeneProduct :BnaC08g34920D Bna.AP1.A2
A02 GeneProduct :BnaA02g12130D Bna.AP1.A2
C02b GeneProduct :BnaC02g23820 Bna.AP1.A2
C02a GeneProduct :BnaC02g45250D Bna.AP1.A2
C04 GeneProduct :BnaC04g14580 Bna.AP1.A2
A07 GeneProduct :BnaA07g25310D Bna.AP1.A2
C06 GeneProduct :BnaC06g27090D Bna.AP1.A2
A02 GeneProduct :BnaA02g00370D Bna.AP1.A2
A03a GeneProduct :BnaA03g02820D Bna.AP1.A2
A03b GeneProduct :BnaA03g13630D Bna.AP1.A2
A10 GeneProduct :BnaA10g22080D Bna.AP1.A2
C02 GeneProduct :BnaC02g00490D Bna.AP1.A2
C03a GeneProduct :BnaC03g04170D Bna.AP1.A2
C09a GeneProduct :BnaC09g46500D Bna.AP1.A2
C09b GeneProduct :BnaC09g46540D Bna.AP1.A2
C03b GeneProduct :BnaC03g16530 Bna.AP1.A2
A03 GeneProduct :BnaA03g13320D Bna.AP1.A2
A10 GeneProduct :BnaA10g05850D Bna.AP1.A2
C03 GeneProduct :BnaC03g16130D Bna.AP1.A2
C09 GeneProduct :BnaC09g27290D Bna.AP1.A2
A09 GeneProduct :BnaA09g30390D Bna.AP1.A2
C05 GeneProduct :BnaC05g18020D Bna.AP1.A2
A10 GeneProduct :BnaA10g18430D Bna.AP1.A2
C09 GeneProduct :BnaC09g41990D Bna.AP1.A2
C03 GeneProduct :BnaC03g60270D Bna.AP1.A2
A06 GeneProduct :BnaA06g37240D Bna.AP1.A2
A08 GeneProduct :BnaA08g16830D Bna.AP1.A2
C07 GeneProduct :BnaC07g47480D Bna.AP1.A2
A02 GeneProduct :BnaA02g08140D Bna.AP1.A2
C02 GeneProduct :BnaC02g11530D Bna.AP1.A2
A03 GeneProduct :BnaA03g10310D Bna.AP1.A2
C03 GeneProduct :BnaC03g12980D Bna.AP1.A2
A01 GeneProduct :BnaA01g26330D Bna.AP1.A2
A03 GeneProduct :BnaA03g35020D Bna.AP1.A2
A05 GeneProduct :BnaA05g21140D Bna.AP1.A2
C03 GeneProduct :BnaC03g40730D Bna.AP1.A2
C01 GeneProduct :BnaC01g33680D Bna.AP1.A2
C05 GeneProduct :BnaC05g34060D Bna.AP1.A2
A03 GeneProduct :BnaA03g06690D Bna.AP1.A2
C03 GeneProduct :BnaC03g08560D Bna.AP1.A2
A10 GeneProduct :BnaA10g17060D Bna.AP1.A2
C09 GeneProduct :BnaC09g40240D Bna.AP1.A2
An GeneProduct :BnaAnng15950D Bna.AP1.A2
A03 GeneProduct :BnaA03g39820D Bna.AP1.A2
A09 GeneProduct :BnaA09g05500D Bna.AP1.A2
C07 GeneProduct :BnaC07g49790D Bna.AP1.A2
An GeneProduct :BnaAnng06660D Bna.AP1.A2
C02 GeneProduct :BnaC02g41870D Bna.AP1.A2
Cna GeneProduct :BnaCnng52780D Bna.AP1.A2
Cnb GeneProduct :BnaCnng52790D Bna.AP1.A2
A04 GeneProduct uniprot:BnaA04g19840D Bna.AP1.A2
C03 GeneProduct :BnaC03g18800D Bna.AP1.C2
C04 GeneProduct :BnaC04g44230D Bna.AP1.A2
A05 GeneProduct :BnaA05g09840D Bna.AP1.A2
Cn GeneProduct :BnaCnng05200D Bna.AP1.A2
A04 GeneProduct uniprot:BnaA04g24340D Bna.AP1.A2
C04a GeneProduct :BnaC04g48150D Bna.AP1.C2
A05 GeneProduct :BnaA05g02680D Bna.AP1.A2
C04b GeneProduct :BnaC04g02520D Bna.AP1.A2
A07 GeneProduct uniprot:BnaA07g17550D Bna.AP1.A2
C04 GeneProduct :BnaC04g23930D Bna.AP1.C2
C06 GeneProduct :BnaC06g16200D Bna.AP1.A2
A04a GeneProduct :BnaA04g27550D Bna.AP1.A2
A04b GeneProduct :BnaA04g27550D Bna.AP1.A2
C01 GeneProduct :BnaC01g40470D Bna.AP1.A2
A04 GeneProduct :BnaA04g24760D Bna.AP1.A2
C03a GeneProduct :BnaC03g05370D Bna.AP1.A2
C04 GeneProduct :BnaC04g48630D Bna.AP1.A2
C03b GeneProduct :BnaC03g23970D Bna.AP1.A2
C08 GeneProduct :BnaC08g29580D Bna.AP1.A2
A03 GeneProduct :BnaA03g19970D Bna.AP1.A2
A05 GeneProduct :BnaA05g12750D Bna.AP1.A2
C06 GeneProduct :BnaC06g11890D Bna.AP1.A2
A05 GeneProduct :BnaA05g22950D Bna.AP1.A2
C03 GeneProduct :BnaC03g39830D Bna.AP1.A2
C05 GeneProduct :BnaC05g36390D Bna.AP1.A2
A01 GeneProduct :BnaA01g08940D Bna.AP1.A2
C01 GeneProduct :BnaC01g40810D Bna.AP1.A2
C04a GeneProduct :BnaC04g51630D Bna.AP1.A2
A04 GeneProduct :BnaA04g26750D Bna.AP1.A2
A05 GeneProduct :BnaA05g01090D Bna.AP1.A2
C04b GeneProduct :BnaC04g00640D Bna.AP1.A2
C02 GeneProduct :BnaC02g03470D Bna.AP1.A2
A10 GeneProduct :BnaA10g26930D Bna.AP1.A2
An GeneProduct :BnaAnng00500D Bna.AP1.A2
Cn GeneProduct :BnaCnng03230D Bna.AP1.A2
A02 GeneProduct :BnaA02g32550D Bna.AP1.A2
C02 GeneProduct :BnaC02g48700D Bna.AP1.A2
A09 GeneProduct :BnaA09g04840D Bna.AP1.A2
C09 GeneProduct :BnaC09g04380D Bna.AP1.A2
A06 GeneProduct :BnaA06g26980D Bna.AP1.A2
C07 GeneProduct :BnaC07g29960D Bna.AP1.A2
A02 GeneProduct :BnaA02g06500D Bna.AP1.A2
A10 GeneProduct :BnaA10g12930D Bna.AP1.A2
C09 GeneProduct :BnaC09g35410D Bna.AP1.A2
A01 GeneProduct :BnaA01g18110D Bna.AP1.A2
A08 GeneProduct :BnaA08g08130D Bna.AP1.A2
A10 GeneProduct :BnaA10g08150D Bna.AP1.A2
C08a GeneProduct :BnaC08g10770D Bna.AP1.A2
C01 GeneProduct :BnaC01g21540D Bna.AP1.A2
C08b GeneProduct :BnaC08g48270D Bna.AP1.A2
A07 GeneProduct :BnaA07g01240D Bna.AP1.A2
C02a GeneProduct :AT5G65080 Bna.AP1.A2
C02b GeneProduct :AT5G65070 Bna.AP1.A2
C09 GeneProduct :BnaC09g05250D Bna.AP1.A2
Cn GeneProduct :BnaCnng43250D Bna.AP1.A2
A02 GeneProduct :BnaA02g16710D Bna.AP1.A2
C07 GeneProduct :BnaC07g02630D Bna.AP1.A2
A05 GeneProduct :BnaA05g01050D Bna.AP1.A2
C04 GeneProduct :BnaC04g00590D Bna.AP1.A2
C05 GeneProduct :BnaC05g00840D Bna.AP1.A2
Cn GeneProduct uniprot:BnaCnng61810D Bna.AP1.A2
Ana GeneProduct :BnaAnng24480D Bna.AP1.C2
A06 GeneProduct :BnaA06g21870D Bna.AP1.A2
Anb GeneProduct :BnaAnng29770D Bna.AP1.A2
A04 GeneProduct uniprot:BnaA04g09490D Bna.AP1.A2
A07 GeneProduct :BnaA07g14740D Bna.AP1.C2
C06 GeneProduct :BnaC06g12530D Bna.AP1.A2
C04 GeneProduct :BnaC04g31720D Bna.AP1.A2
Cn GeneProduct uniprot:BnaCnng15140D Bna.AP1.A2
An GeneProduct :BnaAnng22720D Bna.AP1.C2
C04 GeneProduct :BnaC04g06760D Bna.AP1.A2
A03 GeneProduct :BnaA03g40160D Bna.AP1.A2

References

  1. Flowering time quantitative trait Loci analysis of oilseed brassica in multiple environments and genomewide alignment with Arabidopsis. Long Y, Shi J, Qiu D, Li R, Zhang C, Wang J, et al. Genetics. 2007 Dec;177(4):2433–44. PubMed Europe PMC Scholia
  2. Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus. Shi J, Li R, Qiu D, Jiang C, Long Y, Morgan C, et al. Genetics. 2009 Jul;182(3):851–61. PubMed Europe PMC Scholia
  3. The evolution of Brassica napus FLOWERING LOCUS T paralogues in the context of inverted chromosomal duplication blocks. Wang J, Long Y, Wu B, Liu J, Jiang C, Shi L, et al. BMC Evol Biol. 2009 Nov 25;9:271. PubMed Europe PMC Scholia
  4. Flowering time variation in oilseed rape (Brassica napus L.) is associated with allelic variation in the FRIGIDA homologue BnaA.FRI.a. Wang N, Qian W, Suppanz I, Wei L, Mao B, Long Y, et al. J Exp Bot. 2011 Nov;62(15):5641–58. PubMed Europe PMC Scholia
  5. Genetic and physical mapping of flowering time loci in canola (Brassica napus L.). Raman H, Raman R, Eckermann P, Coombes N, Manoli S, Zou X, et al. Theor Appl Genet. 2013 Jan;126(1):119–32. PubMed Europe PMC Scholia
  6. Comparative analysis of FLC homologues in Brassicaceae provides insight into their role in the evolution of oilseed rape. Zou X, Suppanz I, Raman H, Hou J, Wang J, Long Y, et al. PLoS One. 2012;7(9):e45751. PubMed Europe PMC Scholia
  7. Mutations in single FT- and TFL1-paralogs of rapeseed (Brassica napus L.) and their impact on flowering time and yield components. Guo Y, Hans H, Christian J, Molina C. Front Plant Sci. 2014 Jun 17;5:282. PubMed Europe PMC Scholia
  8. Quantitative trait loci for thermal time to flowering and photoperiod responsiveness discovered in summer annual-type Brassica napus L. Nelson MN, Rajasekaran R, Smith A, Chen S, Beeck CP, Siddique KHM, et al. PLoS One. 2014 Jul 25;9(7):e102611. PubMed Europe PMC Scholia
  9. Diverse regulatory factors associate with flowering time and yield responses in winter-type Brassica napus. Schiessl S, Iniguez-Luy F, Qian W, Snowdon RJ. BMC Genomics. 2015 Sep 29;16:737. PubMed Europe PMC Scholia
  10. Genome-wide association analyses reveal complex genetic architecture underlying natural variation for flowering time in canola. Raman H, Raman R, Coombes N, Song J, Prangnell R, Bandaranayake C, et al. Plant Cell Environ. 2016 Jun;39(6):1228–39. PubMed Europe PMC Scholia
  11. Association Mapping of Flowering Time QTLs and Insight into Their Contributions to Rapeseed Growth Habits. Wang N, Chen B, Xu K, Gao G, Li F, Qiao J, et al. Front Plant Sci. 2016 Mar 24;7:338. PubMed Europe PMC Scholia