Phospholipid biosynthesis (WP9)

Saccharomyces cerevisiae

Phospholipids are amphipathic molecules that consist of a glycerol backbone esterified to a phosphate group and two fatty acids. As a primary structural element of biological membranes, phospholipids play important roles in cell morphology and organelle function. The major phospholipids found in total cell extracts from S. cerevisiae are phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylinositol (PI), and phosphatidylserine (PS); however, the phospholipid composition of yeast changes according to the carbon source used for growth. All major phospholipid classes in S. cerevisiae may trace their synthesis to a common precursor: cytidine diphosphate diacylglycerol (CDP-DAG). CDP-DAG is synthesized in a reaction catalyzed by CDP-DAG synthase, which converts phosphatidic acid (PA) to CDP-DAG using cytidine triphosphate (CTP) as the CDP donor. There are two distinct CDP-DAG synthases in S. cerevisiae: Cds1p, localized in the endoplasmic reticulum (ER), and Tam41p, localized in the mitochondrial matrix. In the ER, CDP-DAG generated by Cds1p can be converted to phosphatidylinositol (PI) or phosphatidylserine (PS) via PI synthase (Pis1p) or PS synthase (Cho1p), respectively. In the mitochondrion, CDP-DAG generated by Tam41p can be sequentially converted to phosphatidylglycerol (PG), which can be further converted to cardiolipin. Synthesis of PI, PG, and cardiolipin occurs through similar mechanisms in mammalian cells; however, unlike yeast, mammals primarily synthesize PS from other phospholipids and not from CDP-DAG. Description adapted from YeastPathways https://pathway.yeastgenome.org/.

Authors

Meredith Braymer , Egon Willighagen , Daniela Digles , Martina Summer-Kutmon , Eric Weitz , and Kristina Hanspers

Activity

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Organisms

Saccharomyces cerevisiae

Communities

Annotations

Pathway Ontology

glycerophospholipid metabolic pathway classic metabolic pathway

Participants

Label Type Compact URI Comment
S-adenosyl-homocysteine Metabolite chebi:57856
CMP Metabolite chebi:60377
glycerol-3-phosphate Metabolite chebi:57597
a 3-O-sn-phosphatidyl-L-serine Metabolite chebi:11750
S-adenosyl-homocysteine Metabolite chebi:59789
phosphatidyl-N-methylethanolamine Metabolite kegg.compound:C01241
H2O Metabolite chebi:15377
CO2 Metabolite chebi:16526
S-adenosyl-L-methionine Metabolite chebi:59789
phosphatidyl-N-dimethylethanolamine Metabolite kegg.compound:C04308
CDP-diacylglycerol Metabolite kegg.compound:C00269
phosphatidylcholine Metabolite chebi:16110
phosphate Metabolite cas:14265-44-2
L-1-phosphatidylethanolamine Metabolite chebi:16038
L-serine Metabolite cas:56-45-1
glycerol Metabolite cas:56-81-5
pyrophosphate Metabolite cas:2466-09-3
H+ Metabolite chebi:15378
OPI3 GeneProduct sgd:S000003834
CHO2 GeneProduct sgd:S000003389
CHO1 GeneProduct sgd:S000000828
CDS1 GeneProduct sgd:S000000233
PSD2 GeneProduct sgd:S000003402
PGS1 GeneProduct sgd:S000000510
CRD1 GeneProduct sgd:S000002301
PSD1 GeneProduct sgd:S000005113
3.1.3.27 GeneProduct eccode:3.1.3.27

References

  1. Regulation of phospholipid synthesis in Saccharomyces cerevisiae by zinc depletion. Carman GM, Han GS. Biochim Biophys Acta. 2007 Mar;1771(3):322–30. PubMed Europe PMC Scholia
  2. URL: https://pathway.yeastgenome.org/YEAST/NEW-IMAGE?type=PATHWAY&object=PHOSLIPSYN2-PWY-1