Transcriptional regulation of memory B cell differentiation (WP5491)

Homo sapiens

Model for signaling pathways and transcription factors that regulate B cell commitment to the germinal center (GC) fate. Boxes that indicate signaling molecules are colored yellow, transcription regulators red, downstream gene targets turquoise and epigenetic modifiers purple. The B cell receptor (BCR), via its signaling subunits Igα and Igβ as well as downstream tyrosine kinases such as SYK and LYN, activates the mitogen-activated protein kinase (MAPK) and phosphoinositide 3-kinase (PI3K)/AKT pathways. MAPK signaling induces the expression of the transcriptional activator myocyte enhancer binding factor 2c (MEF2C), which promotes the transcription of B cell lymphoma-extra large (Bcl2l1) and cyclin D2 (Ccnd2). The expression of the transcriptional repressor inhibitor of DNA binding 3 (ID3) is reduced following B cell activation, allowing for transcription factor 3/4 (TCF3/4)-driven induction of Icosl and Mef2b transcription. PI3K/AKT and nuclear factor-κB (NF-κB) signaling also induce the expression of the transcription factor interferon regulatory factor 4 (IRF4). IRF4 and TCF3/4 induce the expression of the co-activator OBF1 (also known as POU class 2 homeobox associating factor 1 (POU2AF1)), which cooperates with OCT2 (also known as POU class 2 homeobox 2 (POU2F2)) to promote transcription of Slamf1, Syk and Il6. OBF1 and OCT2 can also induce the expression of the transcription factor SPI-B, which acts in a redundant fashion with PU.1 to enhance the transcription of genes encoding B cell surface receptors, such as Cd40, B cell activating factor receptor (Baffr), Toll-like receptor 4 (Tlr4) and Tlr9, and many components of the BCR signaling pathway, including Blnk and Btk. Although transiently elevated levels of IRF4 can induce the expression of B cell lymphoma 6 (BCL-6), sustained IRF4 levels will repress BCL-6 expression. BCL-6 expression is also induced by the transcription factors MEF2B and IRF8/PU.1 as well as the cytokines IL-4 and IL-21, which bind to their respective receptors (IL-4R and IL-21R) and induce signal transducer and activator of transcription 6 (STAT6)/STAT3 signaling. CD40 and/or TLR-driven NF-κB signaling, alongside PI3K/AKT signaling, will induce the expression of the transcription factor MYC, which promotes cellular proliferation by inducing the transcription of Ccnd2/Ccnd3 and the expression of the transcription factor E2F transcription factor 1 (E2F1). E2F1 induces expression of Ezh2 that encodes a Polycomb repressive complex 2 (PRC2) enzymatic component. Enhancer of zeste homologue 2 (EZH2) promotes cell cycle progression by repressing the expression of Cdkn1a, Cdkn2a and Cdkn1b, which encode cyclin-dependent kinase inhibitors. EZH2 also promotes E2F1 release from the retinoblastoma (Rb) protein via phosphorylation of Rb, thereby enhancing E2F1 activation and further EZH2 expression. BCL-6 can directly repress MYC expression, thereby limiting the number of cell divisions that GC B cells undergo. BCL-6 promotes GC B cell development through regulation of numerous genes controlling cellular processes including the DNA damage response, B cell migration, apoptosis, BCR and CD40 signaling, plasma cell differentiation and T cell:B cell interactions. Together, these transcriptional regulators allow for the precise control of GC initiation that is necessary to balance the competing needs of the immune system to induce a protective response while limiting immunopathology. Derived from https://pfocr.wikipathways.org/figures/PMC7538181__41577_2020_446_Fig1_HTML.html

Authors

Eric Weitz and Egon Willighagen

Activity

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Organisms

Homo sapiens

Communities

Annotations

Cell Type Ontology

B cell memory B cell

Participants

Label Type Compact URI Comment
BCR GeneProduct ensembl:ENSG00000186716
SYK GeneProduct ensembl:ENSG00000165025
LYN GeneProduct ensembl:ENSG00000254087
MEF2C GeneProduct ensembl:ENSG00000081189
ID3 GeneProduct ensembl:ENSG00000117318
BCL2L1 GeneProduct ensembl:ENSG00000171552
CCDN2 GeneProduct ensembl:ENSG00000118971
TCF3 GeneProduct ensembl:ENSG00000071564
ICOSLG GeneProduct ensembl:ENSG00000160223
MEF2B GeneProduct ensembl:ENSG00000213999
IRF4 GeneProduct ensembl:ENSG00000137265
TCF4 GeneProduct ensembl:ENSG00000196628
POU2AF1 GeneProduct ensembl:ENSG00000110777 OBF1 in source diagram
POU2F2 GeneProduct ensembl:ENSG00000028277 OCT2 in source diagram
SLAMF1 GeneProduct ensembl:ENSG00000117090
IL6 GeneProduct ensembl:ENSG00000136244
SPI1 GeneProduct ensembl:ENSG00000066336 PU.1 in source comment
BCL6 GeneProduct ensembl:ENSG00000113916
STAT6 GeneProduct ensembl:ENSG00000166888
STAT3 GeneProduct ensembl:ENSG00000168610
NFKB1 GeneProduct ensembl:ENSG00000109320
MYC GeneProduct ensembl:ENSG00000136997
E2F1 GeneProduct ensembl:ENSG00000101412
EZH2 GeneProduct ensembl:ENSG00000106462
CDKN1A GeneProduct ensembl:ENSG00000124762
CDKN1B GeneProduct ensembl:ENSG00000111276
SPIB GeneProduct ensembl:ENSG00000269404
CD40 GeneProduct ensembl:ENSG00000101017
TNFRSF13C GeneProduct ensembl:ENSG00000159958 BAFFR in source diagram
TLR4 GeneProduct ensembl:ENSG00000136869
TLR9 GeneProduct ensembl:ENSG00000239732
CD79A GeneProduct ensembl:ENSG00000105369 Igα (IGa, IGA) in source diagram
CD79B GeneProduct ensembl:ENSG00000007312
IL4R GeneProduct ensembl:ENSG00000077238
IL21R GeneProduct ensembl:ENSG00000103522
IRF8 GeneProduct ensembl:ENSG00000140968
CCND2 GeneProduct ensembl:ENSG00000118971
CCND3 GeneProduct ensembl:ENSG00000112576
CDKN2A GeneProduct ensembl:ENSG00000147889
TLR1 GeneProduct ensembl:ENSG00000174125 ?
TLR3 GeneProduct ensembl:ENSG00000164342 ?
TLR5 GeneProduct ensembl:ENSG00000187554 ?
TLR2 GeneProduct ensembl:ENSG00000137462 ?
TLR4 GeneProduct ensembl:ENSG00000136869 ?
TLR6 GeneProduct ensembl:ENSG00000174130 ?
TLR8 GeneProduct ensembl:ENSG00000101916 ?
TLR7 GeneProduct ensembl:ENSG00000196664 ?
TLR9 GeneProduct ensembl:ENSG00000239732 ?
TLR10 GeneProduct ensembl:ENSG00000174123 ?

References

  1. Transcriptional regulation of memory B cell differentiation. Laidlaw BJ, Cyster JG. Nat Rev Immunol. 2021 Apr;21(4):209–20. PubMed Europe PMC Scholia