Sphingolipid biosynthesis (WP370)

Saccharomyces cerevisiae

Sphingolipids are essential components of the plasma membrane in all eukaryotic cells. S. cerevisiae cells make three complex sphingolipids: inositol-phosphoceramide (IPC), mannose-inositol-phosphoceramide (MIPC), and mannose-(inositol phosphate)2-ceramide (M(IP)2C)(CITS: [12069845]). In the yeast plasma membrane sphingolipids concentrate with ergosterol to form lipid rafts, specialized membrane microdomains implicated in a variety of cellular processes, including sorting of membrane proteins and lipids, as well as organizing and regulating signaling cascades (CITS: [12452424]). Intermediates in sphingolipid biosynthesis have been shown to play important roles as signaling molecules and growth regulators. Sphingolipid long chain bases (LCBs), dihydrosphingosine (DHS) and phytosphingosine (PHS), have been implicated as secondary messengers in signaling pathways that regulate heat stress response (CITS: [9405471])(CITS: [11967828]). Other intermediates, phytoceramide and long-chain base phosphates (LCBPs), have been shown to be components of the tightly-controlled ceramide/LCBP rheostat, which regulates cell growth (CITS: [12684378]). Since phosphoinositol-containing sphingolipids are unique to fungi, the sphingolipid biosynthesis pathway is considered a target for antifungal drugs (CITS: [9092515])(CITS: [15578972]). SOURCE: SGD pathways, http://pathway.yeastgenome.org/server.html

Authors

Meredith Braymer , Daniela Digles , Egon Willighagen , Kristina Hanspers , and Eric Weitz

Activity

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Organisms

Saccharomyces cerevisiae

Communities

Annotations

Pathway Ontology

sphingolipid metabolic pathway

Participants

Label Type Compact URI Comment
ADP Metabolite cas:58-64-0
Inositol phosphate Metabolite hmdb:HMDB0002985
L-serine Metabolite cas:56-45-1
ATP Metabolite cas:1927-31-7
palmitaldehyde Metabolite cas:629-80-1
Coenzyme A Metabolite cas:64885-97-8
NADPH Metabolite cas:53-57-6
O2 Metabolite hmdb:HMDB0001377
Phytosphingosine Metabolite hmdb:HMDB0004610
Inositol-P-ceramide Metabolite hmdb:HMDB0012237
H2O Metabolite hmdb:HMDB0002111
Phytosphingosine-1-P Metabolite hmdb:HMDB0012280
palmityl-CoA Metabolite cas:1763-10-6
NADP Metabolite hmdb:HMDB0000217
SUR1 GeneProduct sgd:S000005978
LCB5 GeneProduct sgd:S000004250
LCB4 GeneProduct sgd:S000005697
LCB1 GeneProduct sgd:S000004911
YPC1 GeneProduct sgd:S000000387
LCB3 GeneProduct sgd:S000003670
CSG2 GeneProduct sgd:S000000240
LAC1 GeneProduct sgd:S000001491
LCB2 GeneProduct sgd:S000002469
YSR3 GeneProduct sgd:S000001761
SUR2 GeneProduct sgd:S000002705
TSC10 GeneProduct sgd:S000000469
AUR1 GeneProduct sgd:S000001487
LAG1 GeneProduct sgd:S000000995
YDC1 GeneProduct sgd:S000006008
IPT1 GeneProduct sgd:S000002479

References

  1. Tsc13p is required for fatty acid elongation and localizes to a novel structure at the nuclear-vacuolar interface in Saccharomyces cerevisiae. Kohlwein SD, Eder S, Oh CS, Martin CE, Gable K, Bacikova D, et al. Mol Cell Biol. 2001 Jan;21(1):109–25. PubMed Europe PMC Scholia
  2. Identification and characterization of a Saccharomyces cerevisiae gene, RSB1, involved in sphingoid long-chain base release. Kihara A, Igarashi Y. J Biol Chem. 2002 Aug 16;277(33):30048–54. PubMed Europe PMC Scholia
  3. Sphingolipid functions in Saccharomyces cerevisiae. Dickson RC, Lester RL. Biochim Biophys Acta. 2002 Jun 13;1583(1):13–25. PubMed Europe PMC Scholia
  4. Lip1p: a novel subunit of acyl-CoA ceramide synthase. Vallée B, Riezman H. EMBO J. 2005 Feb 23;24(4):730–41. PubMed Europe PMC Scholia