Flowering time pathway (WP2603)
Beta vulgaris
Sugar beet (Beta vulgaris subsp. vulgaris L.) belongs to the plant family Amaranthaceae and is a biennial plant responding to long days after a cold period. It is, however, cultivated as an annual crop, since the sucrose stored in the thickened taproot during the first vegetation period is used for bolting and flowering in the second growing season in response to vernalization thus reducing sugar yield. Much less is known on flowering time regulation in sugar beet than in the model plant Arabidopsis thaliana. One major gene involved in bolting/flowering time control in sugar beet is BTC1, controlling expression of the two beet FT homologs, of which one (BvFT1) has become a floral repressor, whereas the other (BvFT2) has retained its flowering-promoting function.
Authors
Martina Bluemel , Alex Pico , Friederike Ehrhart , and Eric WeitzActivity
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Organisms
Communities
Annotations
Pathway Ontology
signaling pathway| Label | Type | Compact URI | Comment |
|---|---|---|---|
| BTC1 | GeneProduct | :gycn.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1?name=0604.scaffold01179:7327..17611 |
| BvGI | GeneProduct | :rzko | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr1.sca004%3A5837935..5855316 |
| BvFLK | GeneProduct | :egiw.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bv4_083560_egiw.t1 |
| BvBBX19 | GeneProduct | :rwmw.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca026%3A149266..156604 |
| BvTOC1 | GeneProduct | :ptfe.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr5.sca022%3A1047369..1053992 |
| BvLD | GeneProduct | :fzoa.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bv7_163790_fzoa.t1 |
| BvMFT1 | GeneProduct | :ouaf.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bv8_181350_ouaf.t1 |
| BvCDF1 | GeneProduct | :ofna.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=0113.scaffold00375%3A165146..170584 |
| BvCEN1 | GeneProduct | :oprx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bvchr7.sca021%3A9823967..9825811 |
| BvPRR5 | GeneProduct | :qrsy.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr3.sca002%3A671449..675338 |
| BvFL1 | GeneProduct | :jqqr.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr6.sca027%3A2790241..27945353 splice variants |
| BvFT1 | GeneProduct | :miuf.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca025%3A4036754..4042619 |
| BvPRR7 | GeneProduct | :dhrx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=0138.scaffold00418%3A210463..221240 |
| BvZTL | GeneProduct | :uhfk.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr8.sca018%3A6791920..6799779 |
| BvLHY | GeneProduct | :txmr.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr1.sca001%3A2093307..2096161 |
| BvGA20OX1 | GeneProduct | :zmmm.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=0326.scaffold00811%3A54237..56901 |
| BvCOL2 | GeneProduct | :iqrn.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr2_un.sca002%3A250009..252388 |
| BvTOL1 | GeneProduct | :tfmt.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=0016.scaffold00051%3A124795..134681 |
| BvCDF2 | GeneProduct | :racn.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr5.sca022%3A1629698..1632943 |
| BvCOL3 | GeneProduct | :jnrj.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bvchr6.sca028%3A276749..281233 |
| BvLDL1 | GeneProduct | :xtxg.1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bv9_215320_xtxg.t1 |
| BvFT2 | GeneProduct | :eewx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr4.sca001%3A3732249..3736670 |
| BvPRR7 | GeneProduct | :dhrx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=0138.scaffold00418%3A210463..221240 |
| BvPRR9 | GeneProduct | :hdgf.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr1.sca001%3A2257734..2266084 |
| BvBFT1 | GeneProduct | :quoj.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_2/?name=Bv3_066330_quoj.t1 |
| BvCOL1 | GeneProduct | :twprt.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr2.sca001%3A5605376..5607877 |
| btc1 | GeneProduct | :gycn.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1?name=0604.scaffold01179:7327..17611 |
| BvFT1 | GeneProduct | :miuf.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca025%3A4036754..4042619 |
| BvFT2 | GeneProduct | :eewx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr4.sca001%3A3732249..3736670 |
| btc1 | GeneProduct | :gycn.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1?name=0604.scaffold01179:7327..17611 |
| BvFT1 | GeneProduct | :miuf.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca025%3A4036754..4042619 |
| BvFT2 | GeneProduct | :eewx.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr4.sca001%3A3732249..3736670 |
| BvBBX19 | GeneProduct | :rwmw.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca026%3A149266..156604 |
| BvBBX19 | GeneProduct | :rwmw.t1 | http://bvseq.molgen.mpg.de/gb2/gbrowse/RefBeet1_1/?name=Bvchr9.sca026%3A149266..156604 |
References
- Evolutionary conservation of the FLOWERING LOCUS C-mediated vernalization response: evidence from the sugar beet (Beta vulgaris). Reeves PA, He Y, Schmitz RJ, Amasino RM, Panella LW, Richards CM. Genetics. 2007 May;176(1):295–307. PubMed Europe PMC Scholia
- Sugar beet contains a large CONSTANS-LIKE gene family including a CO homologue that is independent of the early-bolting (B) gene locus. Chia TYP, Müller A, Jung C, Mutasa-Göttgens ES. J Exp Bot. 2008;59(10):2735–48. PubMed Europe PMC Scholia
- Conservation and divergence of autonomous pathway genes in the flowering regulatory network of Beta vulgaris. Abou-Elwafa SF, Büttner B, Chia T, Schulze-Buxloh G, Hohmann U, Mutasa-Göttgens E, et al. J Exp Bot. 2011 Jun;62(10):3359–74. PubMed Europe PMC Scholia
- An antagonistic pair of FT homologs mediates the control of flowering time in sugar beet. Pin PA, Benlloch R, Bonnet D, Wremerth-Weich E, Kraft T, Gielen JJL, et al. Science. 2010 Dec 3;330(6009):1397–400. PubMed Europe PMC Scholia
- The role of a pseudo-response regulator gene in life cycle adaptation and domestication of beet. Pin PA, Zhang W, Vogt SH, Dally N, Büttner B, Schulze-Buxloh G, et al. Curr Biol. 2012 Jun 19;22(12):1095–101. PubMed Europe PMC Scholia
- The FLC-like gene BvFL1 is not a major regulator of vernalization response in biennial beets. Vogt SH, Weyens G, Lefèbvre M, Bork B, Schechert A, Müller AE. Front Plant Sci. 2014 Apr 14;5:146. PubMed Europe PMC Scholia
- The B2 flowering time locus of beet encodes a zinc finger transcription factor. Dally N, Xiao K, Holtgräwe D, Jung C. Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10365–70. PubMed Europe PMC Scholia