Seed development (WP2279)
Arabidopsis thaliana
This Arabidopsis seed development pathway network in GPML format was projected using the reference rice seed development network [[Pathway:WP2199]] and the Arabidopsis to rice gene homology data sets. The green colored nodes (genes) represent where the Inparanoid-based gene homology was positively predicted based on the cutoffs used. The tool used for making the projection was [http://jaiswallab.cgrb.oregonstate.edu/software/PGS Pathway GeneSWAPPER]. Method is described in the publication [http://www.thericejournal.com/content/6/1/14/ Hanumappa et al. (2013)]. This method creates a new projection, but preserves the interactions between nodes.
Authors
Mamatha Hanumappa , Kristina Hanspers , Pankaj Jaiswal , Martina Summer-Kutmon , Eric Weitz , Lars Willighagen , and Egon WillighagenActivity
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Organisms
Arabidopsis thalianaCommunities
Annotations
Cell Type Ontology
obsolete plant cellPathway Ontology
regulatory pathway signaling pathwayLabel | Type | Compact URI | Comment |
---|---|---|---|
AT4G19720 | GeneProduct | tair.locus:AT4G19720 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
AT4G19750 | GeneProduct | tair.locus:AT4G19750 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
CYP76C6 | GeneProduct | tair.locus:AT1G33720 | Projected from TAIR, homologous to LOC_Os10g08474 (CYP450 ).AP2 transcription factor |
AT2G14710 | GeneProduct | tair.locus:AT2G14710 | Projected from TAIR, homologous to LOC_Os07g35050 (OsFBX237).Cdc2-related protein kinase |
ATNAS2 | GeneProduct | tair.locus:AT5G56080 | Projected from TAIR, homologous to LOC_Os03g19427 (NAS1).NA synthase gene 1 |
AT3G49190 | GeneProduct | tair.locus:AT3G49190 | Projected from TAIR, homologous to LOC_Os05g48260 (RIR 1b). |
AT4G19760 | GeneProduct | tair.locus:AT4G19760 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
CYP76C4 | GeneProduct | tair.locus:AT2G45550 | Projected from TAIR, homologous to LOC_Os10g08474 (CYP450 ).AP2 transcription factor |
CYP76C1 | GeneProduct | tair.locus:AT2G45560 | Projected from TAIR, homologous to LOC_Os10g08474 (CYP450 ).AP2 transcription factor |
AT3G16580 | GeneProduct | tair.locus:AT3G16580 | Projected from TAIR, homologous to LOC_Os07g35050 (OsFBX237).Cdc2-related protein kinase |
NAS1 | GeneProduct | tair.locus:AT5G04950 | Projected from TAIR, homologous to LOC_Os03g19427 (NAS1).NA synthase gene 1 |
RACK1C_AT | GeneProduct | tair.locus:AT3G18130 | Projected from TAIR, homologous to LOC_Os01g49290 (RACK1A).Also called GPB-LR/ RWD |
AT1G03670 | GeneProduct | tair.locus:AT1G03670 | Projected from TAIR, homologous to LOC_Os09g17329 (Ankyrin-like protein).Iron transporter |
AtHsp90.4 | GeneProduct | tair.locus:AT5G56000 | Projected from TAIR, homologous to LOC_Os09g30418 (HSP90).Also called HSP81-2 |
AT4G19800 | GeneProduct | tair.locus:AT4G19800 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
AT3G49210 | GeneProduct | tair.locus:AT3G49210 | Projected from TAIR, homologous to LOC_Os05g48260 (RIR 1b). |
BHLH038 | GeneProduct | tair.locus:AT3G56970 | Projected from TAIR, homologous to LOC_Os01g72370 (IRO2).basic/helix-loop-helix 56 |
CYCB1;5 | GeneProduct | tair.locus:AT1G34460 | Projected from TAIR, homologous to LOC_Os01g59120 (CycB1;1).Seed Shattering |
PGL34 | GeneProduct | tair.locus:AT3G58010 | Projected from TAIR, homologous to LOC_Os12g13170 (ZIP-1a). |
AT4G03460 | GeneProduct | tair.locus:AT4G03460 | Projected from TAIR, homologous to LOC_Os09g17329 (Ankyrin-like protein).Iron transporter |
TEM1 | GeneProduct | tair.locus:AT1G25560 | Projected from TAIR, homologous to LOC_Os01g49830 (RAV1-like). |
CSN5B | GeneProduct | tair.locus:AT1G71230 | Projected from TAIR, homologous to LOC_Os04g56070 (CSN5). |
MYB65 | GeneProduct | tair.locus:AT3G11440 | Projected from TAIR, homologous to LOC_Os01g59660 (GAMYB).regulates GA induction of Amy2A |
ATHB12 | GeneProduct | tair.locus:AT3G61890 | Projected from TAIR, homologous to LOC_Os04g45810 (HOX 22).In Cooper et al. 2003 protein sequence provided matches HOX 22, however it was named HOX6 (AF145730) |
AT2G18110 | GeneProduct | tair.locus:AT2G18110 | Projected from TAIR, homologous to LOC_Os07g42300 (EF-1-d1).EF-1B beta 1, EF-1-beta |
ARD1 | GeneProduct | tair.locus:AT4G14716 | Projected from TAIR, homologous to LOC_Os10g28350 (SIP2).1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 Ethylene induced |
AT1G48860 | GeneProduct | tair.locus:AT1G48860 | Projected from TAIR, homologous to LOC_Os06g04280 ( EPSPS1).5-Enolpyruvylshikimate-3-phosphate synthase 1 |
AT5G48250 | GeneProduct | tair.locus:AT5G48250 | Projected from TAIR, homologous to LOC_Os02g49230 (CCT/B-box zinc finger ). |
ATIREG1 | GeneProduct | tair.locus:AT2G38460 | Projected from TAIR, homologous to LOC_Os06g36450 (ferroportin1). |
HSP81-3 | GeneProduct | tair.locus:AT5G56010 | Projected from TAIR, homologous to LOC_Os09g30418 (HSP90).Also called HSP81-2 |
NAC053 | GeneProduct | tair.locus:AT3G10500 | Projected from TAIR, homologous to LOC_Os02g57650 (NAC2). |
AT3G49200 | GeneProduct | tair.locus:AT3G49200 | Projected from TAIR, homologous to LOC_Os05g48260 (RIR 1b). |
DAD2 | GeneProduct | tair.locus:AT2G35520 | Projected from TAIR, homologous to LOC_Os04g32550 (DAD1).Defender against cell death 1 |
AtcwINV4 | GeneProduct | tair.locus:AT2G36190 | Projected from TAIR, homologous to LOC_Os04g33720 (CIN3). |
SUS1 | GeneProduct | tair.locus:AT5G20830 | Projected from TAIR, homologous to LOC_Os06g09450 (SUS2).Sucrose synthase 2 |
AtcwINV4 | GeneProduct | tair.locus:AT2G36190 | Projected from TAIR, homologous to LOC_Os04g33740 (CIN2). |
CML23 | GeneProduct | tair.locus:AT1G66400 | Projected from TAIR, homologous to LOC_Os05g13580 (CML18). |
AT1G09640 | GeneProduct | tair.locus:AT1G09640 | Projected from TAIR, homologous to LOC_Os02g12800 (EF-1-g).eEF-1G |
AT3G54030 | GeneProduct | tair.locus:AT3G54030 | Projected from TAIR, homologous to LOC_Os03g61010 (TPR-PK).Putative protein kinase |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os10g26060 (GluA-2). |
AT1G62660 | GeneProduct | tair.locus:AT1G62660 | Projected from TAIR, homologous to LOC_Os02g01590 (Vin 2). |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os02g15090 (GluC). |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os02g15169 (GluB-1A).UniProt ID: P14323 |
APUM11 | GeneProduct | tair.locus:AT4G08840 | Projected from TAIR, homologous to LOC_Os12g31000 (Pumilio ).Leucine rich repeat |
EIL1 | GeneProduct | tair.locus:AT2G27050 | Projected from TAIR, homologous to LOC_Os03g20780 (EIL1). |
UGT74F1 | GeneProduct | tair.locus:AT2G43820 | Projected from TAIR, homologous to LOC_Os04g12960 (UDP-glucosyl transferase). |
AGL14 | GeneProduct | tair.locus:AT4G11880 | Projected from TAIR, homologous to LOC_Os10g39130 (MADS 56). |
MPK2 | GeneProduct | tair.locus:AT1G59580 | Projected from TAIR, homologous to LOC_Os02g05480 (MAPK2).UniProt:MAPK2, BIMK1, MAP3, MAPK5, MPK3, MSRMK2 |
AT1G21440 | GeneProduct | tair.locus:AT1G21440 | Projected from TAIR, homologous to LOC_Os12g08760 (OsCCP ).Assigned as OsCCP by Nemeth D and Hanumappa M (10/21/2010) carboxyvinyl-carboxyphosphonate phosphorylmutase |
CYP76C3 | GeneProduct | tair.locus:AT2G45580 | Projected from TAIR, homologous to LOC_Os10g08474 (CYP450 ).AP2 transcription factor |
AT1G63170 | GeneProduct | tair.locus:AT1G63170 | Projected from TAIR, homologous to LOC_Os04g48050 (Ring ZF). |
PGL34 | GeneProduct | tair.locus:AT3G58010 | Projected from TAIR, homologous to LOC_Os04g57020 (LOC_Os04g57020). |
bZIP16 | GeneProduct | tair.locus:AT2G35530 | Projected from TAIR, homologous to LOC_Os12g13170 (ZIP-1a). |
AT4G19820 | GeneProduct | tair.locus:AT4G19820 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
PAKRP1 | GeneProduct | tair.locus:AT4G14150 | Projected from TAIR, homologous to LOC_Os04g28260 (Phragmoplast kinase). |
AT1G48630 | GeneProduct | tair.locus:AT1G48630 | Projected from TAIR, homologous to LOC_Os01g49290 (RACK1A).Also called GPB-LR/ RWD |
CKX2 | GeneProduct | tair.locus:AT2G19500 | Projected from TAIR, homologous to LOC_Os01g10110 (CKX2/ Gn1a).Cytokinin oxidase/dehydrogenase 2 |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os01g55690 (GluA-1). |
ADL6 | GeneProduct | tair.locus:AT1G10290 | Projected from TAIR, homologous to LOC_Os06g13820 (Dynamin). |
ATAPRL6 | GeneProduct | tair.locus:AT4G08930 | Projected from TAIR, homologous to LOC_Os02g51850 (APRL3).Disulfide Isomerase |
ARD1 | GeneProduct | tair.locus:AT4G14716 | Projected from TAIR, homologous to LOC_Os03g06620 (ARD2).1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2; Also called IDI1 and SIP2A |
AT5G47480 | GeneProduct | tair.locus:AT5G47480 | Projected from TAIR, homologous to LOC_Os06g01650 (FERTILLIN). |
NAS4 | GeneProduct | tair.locus:AT1G56430 | Projected from TAIR, homologous to LOC_Os03g19427 (NAS1).NA synthase gene 1 |
CYCB1;3 | GeneProduct | tair.locus:AT3G11520 | Projected from TAIR, homologous to LOC_Os01g59120 (CycB1;1).Seed Shattering |
AT3G55060 | GeneProduct | tair.locus:AT3G55060 | Projected from TAIR, homologous to LOC_Os03g20580 (Centromere protein). |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os02g16830 (GLUB4). |
AT2G30460 | GeneProduct | tair.locus:AT2G30460 | Projected from TAIR, homologous to LOC_Os05g07670 (GPT-A).Assigned as GPT-A by Nemeth D and Hanumappa M (10/21/2010) |
AT3G06620 | GeneProduct | tair.locus:AT3G06620 | Projected from TAIR, homologous to LOC_Os12g37570 (LOC_Os12g37570).Protein Kinase-UniProt ID |
AT2G18110 | GeneProduct | tair.locus:AT2G18110 | Projected from TAIR, homologous to LOC_Os03g29260 ( EF-1-d2).Elongation factor 1 beta 2 |
SUS1 | GeneProduct | tair.locus:AT5G20830 | Projected from TAIR, homologous to LOC_Os03g28330 (SUS1).Sucrose synthase 1 |
UBC1 | GeneProduct | tair.locus:AT1G14400 | Projected from TAIR, homologous to LOC_Os03g57790 (RAD6).transcripts of both OsRad6 and OsSgt1 were found to be strongly expressed in the proliferating tissues such SAM |
AT4G32000 | GeneProduct | tair.locus:AT4G32000 | Projected from TAIR, homologous to LOC_Os02g08530 (LOC_Os02g08530).Protein Kinase-UniProt ID |
PCNA1 | GeneProduct | tair.locus:AT1G07370 | Projected from TAIR, homologous to LOC_Os02g56130 (PCNA).Proliferating cell nuclear antigen expressed strongly in the shoot apical meristem |
AT4G10390 | GeneProduct | tair.locus:AT4G10390 | Projected from TAIR, homologous to LOC_Os02g43290 (Ser/thr PK). |
SEN2 | GeneProduct | tair.locus:AT5G60230 | Projected from TAIR, homologous to LOC_Os11g38930 (TRNA endonuclease).catalytic C-terminal domain containing protein |
SUS1 | GeneProduct | tair.locus:AT5G20830 | Projected from TAIR, homologous to LOC_Os07g42490 (SUS3).Sucrose synthase 3 |
ASP1 | GeneProduct | tair.locus:AT2G37550 | Projected from TAIR, homologous to LOC_Os03g17020 (ADP ribosylation GTPase). |
BZO2H1 | GeneProduct | tair.locus:AT4G02640 | Projected from TAIR, homologous to LOC_Os03g58250 (REB ).Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
PP2A-2 | GeneProduct | tair.locus:AT1G10430 | Projected from TAIR, homologous to LOC_Os02g12580 (PP2A-3). |
AT2G24420 | GeneProduct | tair.locus:AT2G24420 | Projected from TAIR, homologous to LOC_Os08g40790 (bip129 ). |
WRKY17 | GeneProduct | tair.locus:AT2G24570 | Projected from TAIR, homologous to LOC_Os04g21950 (WRKY 51).ABA-inducible & GA-repressible WRKY 51 by itself also represses activation of Amy2A by GAMYB |
ATSPP1 | GeneProduct | tair.locus:AT1G51420 | Projected from TAIR, homologous to LOC_Os01g27880 (SPP1).sucrose-phosphatase 1 |
AT3G02930 | GeneProduct | tair.locus:AT3G02930 | Projected from TAIR, homologous to LOC_Os05g02820 (Myosin like). |
CRU2 | GeneProduct | tair.locus:AT1G03880 | Projected from TAIR, homologous to LOC_Os03g31360 (GluA-3). |
AtcwINV4 | GeneProduct | tair.locus:AT2G36190 | Projected from TAIR, homologous to LOC_Os02g33110 (CIN1). |
ORA59 | GeneProduct | tair.locus:AT1G06160 | Projected from TAIR, homologous to LOC_Os03g64260 (AP2 domain ). |
GSR2 | GeneProduct | tair.locus:AT1G66200 | Projected from TAIR, homologous to LOC_Os02g50240 (GLN1-1).Glutamine synthetase cytosolic isozyme 1-1, also called RGS28 and GS1;1 |
BHLH100 | GeneProduct | tair.locus:AT2G41240 | Projected from TAIR, homologous to LOC_Os01g72370 (IRO2).basic/helix-loop-helix 56 |
ROC1 | GeneProduct | tair.locus:AT4G38740 | Projected from TAIR, homologous to LOC_Os02g02890 (Cyp2). |
AT4G24590 | GeneProduct | tair.locus:AT4G24590 | Projected from TAIR, homologous to LOC_Os02g54080 (MADS-box IL). |
AT5G61550 | GeneProduct | tair.locus:AT5G61550 | Projected from TAIR, homologous to LOC_Os06g04880 (Ser/thr PK). |
ATKDSA2 | GeneProduct | tair.locus:AT1G16340 | Projected from TAIR, homologous to LOC_Os12g10784 (2-d-3-D phosphooctonate aldolase). |
SGT1A | GeneProduct | tair.locus:AT4G23570 | Projected from TAIR, homologous to LOC_Os01g43540 (SGT1).Responds to salicylic acid in chemically induced biotic response |
AHA1 | GeneProduct | tair.locus:AT2G18960 | Projected from TAIR, homologous to LOC_Os04g56160 (Plasma membrane ATPase). |
AT3G55940 | GeneProduct | tair.locus:AT3G55940 | Projected from TAIR, homologous to LOC_Os07g49330 (Phospholipase C). |
ATMYC-2 | GeneProduct | tair.locus:AT1G63650 | Projected from TAIR, homologous to LOC_Os04g47080 (RA).seed coat color, endosperm color |
FBA1 | GeneProduct | tair.locus:AT2G21330 | Projected from TAIR, homologous to LOC_Os11g07020 (ALDP).Aldolase |
C AL | GeneProduct | tair.locus:AT1G26310 | Projected from TAIR, homologous to LOC_Os03g54160 (MADS 14).Also called AGL10, RAP1B |
ATHB12 | GeneProduct | tair.locus:AT3G61890 | Projected from TAIR, homologous to LOC_Os09g35910 (HOX6).Cooper et al. 2003 called this leucine zipper and misnamed HOX 22 as HOX 6 (22834) |
PSBO1 | GeneProduct | tair.locus:AT5G66570 | Projected from TAIR, homologous to LOC_Os01g31690 (PSII-OEP33).No symbol in gramene so OEP33 was assigned. 33kDa oxygen evolving protein of photosystem II |
AT1G09640 | GeneProduct | tair.locus:AT1G09640 | Projected from TAIR, homologous to LOC_Os06g37440 (EF-1-g3).eEF-1B gamma 3 |
AT3G61700 | GeneProduct | tair.locus:AT3G61700 | Projected from TAIR, homologous to LOC_Os01g12080 (LOC_Os01g12080). |
CAL | GeneProduct | tair.locus:AT1G26310 | Projected from TAIR, homologous to LOC_Os07g01820 (MADS 15).Also called RAP1A |
PP2A-2 | GeneProduct | tair.locus:AT1G10430 | Projected from TAIR, homologous to LOC_Os06g37660 (PP2A1). |
PRB1 | GeneProduct | tair.locus:AT2G14580 | Projected from TAIR, homologous to LOC_Os01g28450 (Pr1b). |
AT4G22240 | GeneProduct | tair.locus:AT4G22240 | Projected from TAIR, homologous to LOC_Os09g04790 (Fibrillin). |
AT1G32430 | GeneProduct | tair.locus:AT1G32430 | Projected from TAIR, homologous to LOC_Os07g35050 (OsFBX237).Cdc2-related protein kinase |
PP2A-3 | GeneProduct | tair.locus:AT2G42500 | Projected from TAIR, homologous to LOC_Os03g59060 (PP2A2). |
BZO2H1 | GeneProduct | tair.locus:AT4G02640 | Projected from TAIR, homologous to LOC_Os07g08420 (RISBZ1).Functionaly redundant and compensatory expression between RISBZI and RPBF. Double Knock-Down mutant (KD-RISBZ1/KD-RPBF) caused most expression change in OsLKR/SDH |
AT2G30460 | GeneProduct | tair.locus:AT2G30460 | Projected from TAIR, homologous to LOC_Os01g07310 (GPT2-B).Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) |
CYCD4;2 | GeneProduct | tair.locus:AT5G10440 | Projected from TAIR, homologous to LOC_Os07g42860 (CycD2-2). |
ATSPP1 | GeneProduct | tair.locus:AT1G51420 | Projected from TAIR, homologous to LOC_Os02g05030 (SPP2).sucrose-phosphatase 2 |
ADK1 | GeneProduct | tair.locus:AT3G09820 | Projected from TAIR, homologous to LOC_Os02g41590 (OsAK).Adenosine kinase |
XDH2 | GeneProduct | tair.locus:AT4G34900 | Projected from TAIR, homologous to LOC_Os03g31550 (AOXDH). |
AT1G62660 | GeneProduct | tair.locus:AT1G62660 | Projected from TAIR, homologous to LOC_Os04g45290 (Vin1). |
ATHB7 | GeneProduct | tair.locus:AT2G46680 | Projected from TAIR, homologous to LOC_Os04g45810 (HOX 22).In Cooper et al. 2003 protein sequence provided matches HOX 22, however it was named HOX6 (AF145730) |
CF1 | GeneProduct | tair.locus:AT1G59610 | Projected from TAIR, homologous to LOC_Os06g13820 (Dynamin). |
ILR1 | GeneProduct | tair.locus:AT3G02875 | Projected from TAIR, homologous to LOC_Os03g62060 (IAA amidohydrolase). |
HSP40 | GeneProduct | :LOC_Os03g44620 | |
bHLH60 | GeneProduct | :LOC_Os08g04390 | Helix-loop-helix TF |
AGL8 | GeneProduct | tair.locus:AT5G60910 | Projected from TAIR, homologous to LOC_Os07g41370 (MADS 18).Also called MADS 28 |
PPDK | GeneProduct | tair.locus:AT4G15530 | Projected from TAIR, homologous to LOC_Os05g33570 (PPDKB).Involved in grain filling |
AtkdsA1 | GeneProduct | tair.locus:AT1G79500 | Projected from TAIR, homologous to LOC_Os12g10784 (2-d-3-D phosphooctonate aldolase). |
PAP85 | GeneProduct | tair.locus:AT3G22640 | Projected from TAIR, homologous to LOC_Os03g57960 (GB2).Globulin 2 |
BTB/POZ | GeneProduct | :LOC_Os10g29390 | 2-keto-3-deoxy-6-phosphogluconate aldolase |
OCP3 | GeneProduct | tair.locus:AT5G11270 | Projected from TAIR, homologous to LOC_Os06g39906 (LOC_Os06g39906 ). |
NB-ARC domain protein | GeneProduct | :LOC_Os11g34880 | Jacalin |
ZF-like | GeneProduct | :LOC_Os01g40990 | |
AT4G19200 | GeneProduct | tair.locus:AT4G19200 | Projected from TAIR, homologous to LOC_Os05g02780 (grpA3). |
EXPB4 | GeneProduct | :LOC_Os10g40730 | Beta-expansin-4 |
BMY3 | GeneProduct | tair.locus:AT5G18670 | Projected from TAIR, homologous to LOC_Os07g47120 (Bam 4). |
AT1G56700 | GeneProduct | tair.locus:AT1G56700 | Projected from TAIR, homologous to LOC_Os03g25270 (Pyrrolidone-Carboxylpeptidase). |
SPS1F | GeneProduct | tair.locus:AT5G20280 | Projected from TAIR, homologous to LOC_Os08g20660 (SPS-O spp).sucrose-phosphate synthase-Oncidium spp= named after table III on Yamakawa et al. (2007) |
IAA31 | GeneProduct | tair.locus:AT3G17600 | Projected from TAIR, homologous to LOC_Os01g18360 (IAA4). |
AT2G21130 | GeneProduct | tair.locus:AT2G21130 | Projected from TAIR, homologous to LOC_Os02g02890 (Cyp2). |
BMY7 | GeneProduct | tair.locus:AT3G23920 | Projected from TAIR, homologous to LOC_Os03g04770 (Bam 7). |
AT5G50100 | GeneProduct | tair.locus:AT5G50100 | Projected from TAIR, homologous to LOC_Os04g57310 (Thioredoxin-like).thiol-disulphide oxidoreductase DCC |
ASKTHETA | GeneProduct | tair.locus:AT4G00720 | Projected from TAIR, homologous to LOC_Os10g37740 (Shaggy kinase). |
AT2G47060 | GeneProduct | tair.locus:AT2G47060 | Projected from TAIR, homologous to LOC_Os05g04520 (Pto kinase Interactor 1). |
PMI1 | GeneProduct | tair.locus:AT1G42550 | Projected from TAIR, homologous to LOC_Os09g38090 (LOC_Os09g38090). |
PCNA2 | GeneProduct | tair.locus:AT2G29570 | Projected from TAIR, homologous to LOC_Os02g56130 (PCNA).Proliferating cell nuclear antigen expressed strongly in the shoot apical meristem |
GDSL-like Lipase | GeneProduct | :LOC_Os10g05088 | SGNH_plant_lipase |
PP2A-1 | GeneProduct | tair.locus:AT1G59830 | Projected from TAIR, homologous to LOC_Os02g12580 (PP2A-3). |
SEN1 | GeneProduct | tair.locus:AT3G45590 | Projected from TAIR, homologous to LOC_Os11g38930 (TRNA endonuclease).catalytic C-terminal domain containing protein |
SSIV | GeneProduct | tair.locus:AT4G18240 | Projected from TAIR, homologous to LOC_Os05g45720 (SSIVb).Also called ALK |
UGT74F1 | GeneProduct | tair.locus:AT2G43840 | Projected from TAIR, homologous to LOC_Os04g12960 (UDP-glucosyl transferase). |
WRKY11 | GeneProduct | tair.locus:AT4G31550 | Projected from TAIR, homologous to LOC_Os04g21950 (WRKY 51).ABA-inducible & GA-repressible WRKY 51 by itself also represses activation of Amy2A by GAMYB |
AT5G35460 | GeneProduct | tair.locus:AT5G35460 | Projected from TAIR, homologous to LOC_Os01g40280 (RSR1). |
UBC2 | GeneProduct | tair.locus:AT2G02760 | Projected from TAIR, homologous to LOC_Os03g57790 (RAD6).transcripts of both OsRad6 and OsSgt1 were found to be strongly expressed in the proliferating tissues such SAM |
AT5G02230 | GeneProduct | tair.locus:AT5G02230 | Projected from TAIR, homologous to LOC_Os03g16670 (HAD-like). |
AT5G16730 | GeneProduct | tair.locus:AT5G16730 | Projected from TAIR, homologous to LOC_Os05g02820 (Myosin like). |
SAM cmtr | GeneProduct | :LOC_Os02g06770 | |
Kinesin | GeneProduct | :LOC_Os03g43100 | |
SS3 | GeneProduct | tair.locus:AT1G11720 | Projected from TAIR, homologous to LOC_Os04g53310 (SSIIIb).Also called ALK |
AT1G30230 | GeneProduct | tair.locus:AT1G30230 | Projected from TAIR, homologous to LOC_Os03g29260 ( EF-1-d2).Elongation factor 1 beta 2 |
PKT3 | GeneProduct | tair.locus:AT2G33150 | Projected from TAIR, homologous to LOC_Os02g57260 (Keto acyl CoA thiolase). |
AT1G47390 | GeneProduct | tair.locus:AT1G47390 | Projected from TAIR, homologous to LOC_Os07g35050 (OsFBX237).Cdc2-related protein kinase |
bZIP68 | GeneProduct | tair.locus:AT1G32150 | Projected from TAIR, homologous to LOC_Os12g13170 (ZIP-1a). |
eIFiso4G1 | GeneProduct | tair.locus:AT5G57870 | Projected from TAIR, homologous to LOC_Os04g42140 (eif(iso)4g). |
Fructose-6-phosphate 1-phosphotransferase | GeneProduct | :LOC_Os08g25720 | |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os03g31360 (GluA-3). |
TEM2 | GeneProduct | tair.locus:AT1G68840 | Projected from TAIR, homologous to LOC_Os01g49830 (RAV1-like). |
AT2G46140 | GeneProduct | tair.locus:AT2G46140 | Projected from TAIR, homologous to LOC_Os05g50710 (LEA 14-A). |
GABA permease | GeneProduct | :LOC_Os01g71720 | Amino acid/polyamine transporter |
OsIAA13 | GeneProduct | :LOC_Os03g53150 | |
AT5G44080 | GeneProduct | tair.locus:AT5G44080 | Projected from TAIR, homologous to LOC_Os01g64730 (OSE2).bZIP transcription factor domain containing protein |
MPK1 | GeneProduct | tair.locus:AT1G10210 | Projected from TAIR, homologous to LOC_Os02g05480 (MAPK2).UniProt:MAPK2, BIMK1, MAP3, MAPK5, MPK3, MSRMK2 |
AT2G05830 | GeneProduct | tair.locus:AT2G05830 | Projected from TAIR, homologous to LOC_Os11g11050 (IDI2).Initiation factor 2 subunit family protein |
ATERF4 | GeneProduct | tair.locus:AT3G15210 | Projected from TAIR, homologous to LOC_Os01g58420 (AP37). |
SNAC1 | GeneProduct | :LOC_Os03g60080 | |
IDS1/ MT4A | GeneProduct | :LOC_Os12g38270 | |
GBSSII | GeneProduct | :LOC_Os07g22930 | Also called ALK |
AT4G25160 | GeneProduct | tair.locus:AT4G25160 | Projected from TAIR, homologous to LOC_Os06g04880 (Ser/thr PK). |
AT3G17850 | GeneProduct | tair.locus:AT3G17850 | Projected from TAIR, homologous to LOC_Os03g50390 (LOC_Os03g50390).Protein Kinase-UniProt ID |
AT2G28440 | GeneProduct | tair.locus:AT2G28440 | Projected from TAIR, homologous to LOC_Os05g13940 (PRP1). |
AT1G56560 | GeneProduct | tair.locus:AT1G56560 | Projected from TAIR, homologous to LOC_Os01g22900 (INV2).Neutral/alkaline invertase 2 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
GLT1 | GeneProduct | tair.locus:AT5G53460 | Projected from TAIR, homologous to LOC_Os05g48200 (Phosphoglucomutase). |
AT2G45300 | GeneProduct | tair.locus:AT2G45300 | Projected from TAIR, homologous to LOC_Os06g04280 ( EPSPS1).5-Enolpyruvylshikimate-3-phosphate synthase 1 |
APL4/ AGPL4 | GeneProduct | :LOC_Os07g13980 | |
CYCD4;1 | GeneProduct | tair.locus:AT5G65420 | Projected from TAIR, homologous to LOC_Os07g42860 (CycD2-2). |
ATAMY1 | GeneProduct | tair.locus:AT4G25000 | Projected from TAIR, homologous to LOC_Os09g28400 (Amy3A). |
AT5G59010 | GeneProduct | tair.locus:AT5G59010 | Projected from TAIR, homologous to LOC_Os03g61010 (TPR-PK).Putative protein kinase |
SPS-Zm | GeneProduct | :LOC_Os06g42824 | sucrose-phosphate synthase-Zea mays= named after table III on Yamakawa et al. (2007) |
AT5G47490 | GeneProduct | tair.locus:AT5G47490 | Projected from TAIR, homologous to LOC_Os06g01650 (FERTILLIN). |
Disease resistance-like | GeneProduct | :LOC_Os12g40490 | LIM domain-containing protein, putative, expressed |
AT4G31340 | GeneProduct | tair.locus:AT4G31340 | Projected from TAIR, homologous to LOC_Os08g40790 (bip129 ). |
KAB1 | GeneProduct | tair.locus:AT1G04690 | Projected from TAIR, homologous to LOC_Os02g57240 (KOB1).Probable voltage-gated potassium channel subunit beta |
GPA1 | GeneProduct | tair.locus:AT2G26300 | Projected from TAIR, homologous to LOC_Os05g26890 (GP-alpha-1).G-alpha protein also called GPA1/D1/GA1 |
AT1G22410 | GeneProduct | tair.locus:AT1G22410 | Projected from TAIR, homologous to LOC_Os03g27230 (DAHPS1).3-deoxy-D-arabino heptulosonate-7-phosphate synthase 1 |
AT5G36160 | GeneProduct | tair.locus:AT5G36160 | Projected from TAIR, homologous to LOC_Os02g20360 (NAAT1).nicotianamine aminotransferase |
NAC5 | GeneProduct | :LOC_Os11g08210 | ABA related |
SS3 | GeneProduct | tair.locus:AT1G11720 | Projected from TAIR, homologous to LOC_Os08g09230 (SSIIIa/ Flo5).expression diminished during grain filling at high temperatures |
AMY3 | GeneProduct | tair.locus:AT1G69830 | Projected from TAIR, homologous to LOC_Os01g51754 (Amy4A). |
NAC2 | GeneProduct | tair.locus:AT5G04410 | Projected from TAIR, homologous to LOC_Os02g57650 (NAC2). |
AT1G60900 | GeneProduct | tair.locus:AT1G60900 | Projected from TAIR, homologous to LOC_Os11g41820 (U2 snRNP). |
SPS-So | GeneProduct | :LOC_Os06g43630 | sucrose-phosphate synthase-Saccharum officinarum= named after table III on Yamakawa et al. (2007) |
PR1 | GeneProduct | tair.locus:AT2G14610 | Projected from TAIR, homologous to LOC_Os01g28450 (Pr1b). |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os10g26060 (GluA-2). |
ATMTAN2 | GeneProduct | tair.locus:AT4G34840 | Projected from TAIR, homologous to LOC_Os06g02220 (MTN).Methylthioadenosine/S-adenosyl homocysteine nucleosidase |
RPS20 | GeneProduct | :LOC_Os06g04290 | P35686 |
AT3G44620 | GeneProduct | tair.locus:AT3G44620 | Projected from TAIR, homologous to LOC_Os08g44320 (Phosphotyrosine). |
AT1G33260 | GeneProduct | tair.locus:AT1G33260 | Projected from TAIR, homologous to LOC_Os02g43290 (Ser/thr PK). |
ZOS1-15 | GeneProduct | :LOC_Os01g62190 | Salt-stress ABA related |
SEP3 | GeneProduct | tair.locus:AT1G24260 | Projected from TAIR, homologous to LOC_Os08g41950 (MADS7/45).also called MADS 45, AGL6, M79 |
ATARD2 | GeneProduct | tair.locus:AT4G14710 | Projected from TAIR, homologous to LOC_Os03g06620 (ARD2).1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2; Also called IDI1 and SIP2A |
MYB33 | GeneProduct | tair.locus:AT5G06100 | Projected from TAIR, homologous to LOC_Os01g59660 (GAMYB).regulates GA induction of Amy2A |
ALDH7B4 | GeneProduct | tair.locus:AT1G54100 | Projected from TAIR, homologous to LOC_Os09g26880 (ALDH7).Needed for seed maturation and viability. Expression Patterns during Seed Development Correspond with Pigment Accumulation Patterns in Seeds Plays a role in the removal of MDA that forms during seed desiccation |
DOF ZF | GeneProduct | :LOC_Os02g49440 | |
WRKY40 | GeneProduct | tair.locus:AT1G80840 | Projected from TAIR, homologous to LOC_Os02g08440 (WRKY 71).ABA-inducible & GA-repressible Interaction between WRKY 51 and 71 enhances the binding affinity of WRKY71 to the Amy32b promoter WRKY 71 by itself also represses activation of Amy2A by GAMYB |
CIB22 | GeneProduct | tair.locus:AT4G34700 | Projected from TAIR, homologous to LOC_Os06g50000 (Complex 1L).Assigned as Complex 1L by Nemeth D and Hanumappa M (10/21/2010) complex 1 family protein-like (LYR family) |
PP2A-B | GeneProduct | :LOC_Os05g40350 | |
GF14A | GeneProduct | :LOC_Os08g37490 | WIN2, WIP2 |
PROLM26 | GeneProduct | :LOC_Os07g10580 | Prolamin precursor, also called RP5 |
MT2b | GeneProduct | :LOC_Os05g02070 | |
IAA1 | GeneProduct | :LOC_Os01g08320 | |
LOC_Os01g14110 | GeneProduct | :LOC_Os01g14110 | Assigned as bHLH-tf by Nemeth D and Hanumappa M (10/21/2010) |
TAP46 | GeneProduct | tair.locus:AT5G53000 | Projected from TAIR, homologous to LOC_Os12g04290 (TAP46). |
Pit | GeneProduct | :LOC_Os01g05620 | |
AAP6 | GeneProduct | tair.locus:AT5G49630 | Projected from TAIR, homologous to LOC_Os07g04180 (Permease). |
SSII-3 | GeneProduct | :LOC_Os06g12450 | expression diminished during grain filling at high temperatures |
SUS6 | GeneProduct | tair.locus:AT1G73370 | Projected from TAIR, homologous to LOC_Os04g24430 (SuSy6).Sucrose synthase 6 |
NAC 10 | GeneProduct | :LOC_Os11g03300 | |
AT5G59210 | GeneProduct | tair.locus:AT5G59210 | Projected from TAIR, homologous to LOC_Os03g16120 (Myosin like). |
Sub9 | GeneProduct | :LOC_Os01g58290 | Amino acid transporters |
AT3G60320 | GeneProduct | tair.locus:AT3G60320 | Projected from TAIR, homologous to LOC_Os10g41310 (DUF630).Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
CACTA, En/Spm | GeneProduct | :LOC_Os01g09220 | |
CDKA-2 | GeneProduct | :LOC_Os02g03060 | |
PHT4;3 | GeneProduct | tair.locus:AT3G46980 | Projected from TAIR, homologous to LOC_Os01g63290 (PHT4;3).Na+ dep inorg phosphate cotransporter |
Oryzain alpha Protease | GeneProduct | :LOC_Os04g55650 | |
msrB-1 | GeneProduct | :LOC_Os03g24600 | 2 more IDs found on Gramene. Hence called 1, 2 and 3 to differentiate. LOC_Os06g27760=msrB-2, LOC_Os05g33510=msrB-3 (D Nemeth and M Hanumappa 08/17/2010). |
AT5G59750 | GeneProduct | tair.locus:AT5G59750 | Projected from TAIR, homologous to LOC_Os05g38570 (GTP cyclohydrolase).GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase |
UCH3 | GeneProduct | tair.locus:AT4G17510 | Projected from TAIR, homologous to LOC_Os02g43760 (Ubiquitin proteinase).ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed |
PP2A-1 | GeneProduct | tair.locus:AT1G59830 | Projected from TAIR, homologous to LOC_Os06g37660 (PP2A1). |
LOC_Os01g62740 | GeneProduct | :LOC_Os01g62740 | |
BMY7 | GeneProduct | tair.locus:AT3G23920 | Projected from TAIR, homologous to LOC_Os10g32810 (Bam 5). |
ERF15 | GeneProduct | tair.locus:AT2G31230 | Projected from TAIR, homologous to LOC_Os03g64260 (AP2 domain ). |
SUVR4 | GeneProduct | tair.locus:AT3G04380 | Projected from TAIR, homologous to LOC_Os02g40770 (SET domain protein).histone-lysine N-methyltransferase |
HCF173 | GeneProduct | tair.locus:AT1G16720 | Projected from TAIR, homologous to LOC_Os06g49120 (UOS1).NAD(P)-binding/Rossman fold |
SPK | GeneProduct | :LOC_Os10g39420 | required for storage product accumulation during seed development seed-specific protein kinase |
AG | GeneProduct | tair.locus:AT4G18960 | Projected from TAIR, homologous to LOC_Os01g10504 (MADS 3).Also called RAG |
USP1 | GeneProduct | :LOC_Os07g47620 | ETFP adenine nucleotide |
LOC_Os03g56940 | GeneProduct | :LOC_Os03g56940 | |
AT1G06890 | GeneProduct | tair.locus:AT1G06890 | Projected from TAIR, homologous to LOC_Os01g07310 (GPT2-B).Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) |
ATBT1 | GeneProduct | tair.locus:AT4G32400 | Projected from TAIR, homologous to LOC_Os05g07900 (BT1-1). |
SPS-Hv | GeneProduct | :LOC_Os02g09170 | sucrose-phosphate synthase-Hordeum vulgare= named after table III on Yamakawa et al. (2007) |
AT3G29010 | GeneProduct | tair.locus:AT3G29010 | Projected from TAIR, homologous to LOC_Os08g33810 (LPLA). |
NAS2 | GeneProduct | :LOC_Os03g19420 | NA synthase gene 2 |
AT1G78420 | GeneProduct | tair.locus:AT1G78420 | Projected from TAIR, homologous to LOC_Os02g14720 (GW2).encodes a RING protein with E3 ubiquitin ligase activity |
GDSL-like Lipase | GeneProduct | :LOC_Os01g11650 | |
ARF1 | GeneProduct | :LOC_Os11g32110 | |
AT1G20810 | GeneProduct | tair.locus:AT1G20810 | Projected from TAIR, homologous to LOC_Os02g02550 (UGP ). |
DEP | GeneProduct | :LOC_Os11g29370 | Haloacid dehalogenase-like hydrolase family protein |
flavanone 3-hydroxylase | GeneProduct | :LOC_Os08g37456 | 2-oxoglutarate (2OG) - Fe(II) oxygenase |
BBTI4 | GeneProduct | :LOC_Os01g03340 | Bowman-Birk type bran trypsin inhibitor |
HMG1 | GeneProduct | :LOC_Os06g51220 | |
PPROL 14 E | GeneProduct | :LOC_Os05g26377 | 13 kDa Prolamin, also called PPROL 14, PPROL 4A, PPROL 7, PG5a, PROLM 8, PROLM 9, UniProt ID: Q95737 |
CWINV2 | GeneProduct | tair.locus:AT3G52600 | Projected from TAIR, homologous to LOC_Os02g33110 (CIN1). |
AGD6 | GeneProduct | tair.locus:AT3G53710 | Projected from TAIR, homologous to LOC_Os03g17020 (ADP ribosylation GTPase). |
AGL6 | GeneProduct | tair.locus:AT2G45650 | Projected from TAIR, homologous to LOC_Os02g45770 (MADS 6).Also called MFO1 |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os02g16830 (GLUB4). |
SUS3 | GeneProduct | tair.locus:AT4G02280 | Projected from TAIR, homologous to LOC_Os03g22120 (SuSy4).Sucrose synthase 4 |
GRF7 | GeneProduct | tair.locus:AT3G02520 | Projected from TAIR, homologous to LOC_Os02g36974 (GF14-e). |
CDKA1 | GeneProduct | tair.locus:AT3G48750 | Projected from TAIR, homologous to LOC_Os03g02680 (CDKA-1). |
anac103 | GeneProduct | tair.locus:AT5G64060 | Projected from TAIR, homologous to LOC_Os05g35170 (IDEF2).IDE-binding factor 2 |
SUS4 | GeneProduct | tair.locus:AT3G43190 | Projected from TAIR, homologous to LOC_Os03g28330 (SUS1).Sucrose synthase 1 |
AT2G46420 | GeneProduct | tair.locus:AT2G46420 | Projected from TAIR, homologous to LOC_Os01g12080 (LOC_Os01g12080). |
ATAMY1 | GeneProduct | tair.locus:AT4G25000 | Projected from TAIR, homologous to LOC_Os08g36900 (Amy3E). |
prx61 | GeneProduct | :LOC_Os04g59190 | Class III peroxidase 61 |
MADS 13 | GeneProduct | :LOC_Os12g10540 | Also called MAF1 |
SWEET3 | GeneProduct | tair.locus:AT5G53190 | Projected from TAIR, homologous to LOC_Os05g12320 (SWEET3a). |
EMB2729 | GeneProduct | tair.locus:AT3G20440 | Projected from TAIR, homologous to LOC_Os06g26234 (BEIII). |
sks17 | GeneProduct | tair.locus:AT5G66920 | Projected from TAIR, homologous to LOC_Os07g02810 (Pectinesterase). |
VIP1-like | GeneProduct | :LOC_Os06g02240 | |
AREB3 | GeneProduct | tair.locus:AT3G56850 | Projected from TAIR, homologous to LOC_Os05g41070 (AREB). |
PPDK | GeneProduct | tair.locus:AT4G15530 | Projected from TAIR, homologous to LOC_Os03g31750 (PPDKA).Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) |
ATPU1 | GeneProduct | tair.locus:AT5G04360 | Projected from TAIR, homologous to LOC_Os04g08270 (PUL).expression diminished during grain filling at high temperatures |
COL9 | GeneProduct | tair.locus:AT3G07650 | Projected from TAIR, homologous to LOC_Os02g49230 (CCT/B-box zinc finger ). |
CWINV2 | GeneProduct | tair.locus:AT3G52600 | Projected from TAIR, homologous to LOC_Os04g33720 (CIN3). |
TUBB3 | GeneProduct | :LOC_Os06g46000 | Tubulin beta-3 chain |
EFE | GeneProduct | tair.locus:AT1G05010 | Projected from TAIR, homologous to LOC_Os09g27750 (ACO1). |
AT3G12630 | GeneProduct | tair.locus:AT3G12630 | Projected from TAIR, homologous to LOC_Os08g39450 (SAP11).Also called ZFP60 |
SVP | GeneProduct | tair.locus:AT2G22540 | Projected from TAIR, homologous to LOC_Os03g08754 (MADS 47).Also called MDP |
KRP3 | GeneProduct | :LOC_Os11g40030 | |
DMAS1 | GeneProduct | :LOC_Os03g13390 | Deoxymugineic acid synthase1 |
CIN5 | GeneProduct | :LOC_Os04g56930 | |
LOC_Os03g07360 | GeneProduct | :LOC_Os03g07360 | |
RIC1 | GeneProduct | :LOC_Os01g37800 | |
RBCL | GeneProduct | tair.locus:ATCG00490 | Projected from TAIR, homologous to LOC_Os10g21268 (rbcL). |
CWINV2 | GeneProduct | tair.locus:AT3G52600 | Projected from TAIR, homologous to LOC_Os04g33740 (CIN2). |
AT5G52580 | GeneProduct | tair.locus:AT5G52580 | Projected from TAIR, homologous to LOC_Os02g48000 (DEK1). |
GL3 | GeneProduct | tair.locus:AT5G41315 | Projected from TAIR, homologous to LOC_Os04g47080 (RA).seed coat color, endosperm color |
AtHsp90.2 | GeneProduct | tair.locus:AT5G56030 | Projected from TAIR, homologous to LOC_Os09g30418 (HSP90).Also called HSP81-2 |
GF14F | GeneProduct | :LOC_Os03g50290 | G-box factor 14-3-3 f |
PSB29 | GeneProduct | tair.locus:AT2G20890 | Projected from TAIR, homologous to LOC_Os07g37250 (THF1).Inositol phosphatase |
ADK2 | GeneProduct | tair.locus:AT5G03300 | Projected from TAIR, homologous to LOC_Os02g41590 (OsAK).Adenosine kinase |
ALDH10A8 | GeneProduct | tair.locus:AT1G74920 | Projected from TAIR, homologous to LOC_Os08g32870 (BADH2).SCENTED KERNEL 2 (fragrance) betaine-aldehyde dehydrogenase 2 |
GPT2 | GeneProduct | tair.locus:AT1G61800 | Projected from TAIR, homologous to LOC_Os08g08840 (GPT1). |
BEI | GeneProduct | :LOC_Os06g51084 | expression diminished during grain filling at high temperatures |
ING1 | GeneProduct | tair.locus:AT3G24010 | Projected from TAIR, homologous to LOC_Os03g04980 (PHD zf). |
AT1G04770 | GeneProduct | tair.locus:AT1G04770 | Projected from TAIR, homologous to LOC_Os05g43040 (Male sterility protein). |
AT1G57720 | GeneProduct | tair.locus:AT1G57720 | Projected from TAIR, homologous to LOC_Os06g37440 (EF-1-g3).eEF-1B gamma 3 |
LOC_Os08g04580 | GeneProduct | :LOC_Os08g04580 | Thioredoxin |
CDF2 | GeneProduct | tair.locus:AT5G39660 | Projected from TAIR, homologous to LOC_Os07g48570 (AOPBP-L). |
CRL1 | GeneProduct | :LOC_Os03g05510 | |
VIP1 | GeneProduct | tair.locus:AT1G43700 | Projected from TAIR, homologous to LOC_Os11g06170 (bZIP). |
CKX4 | GeneProduct | tair.locus:AT4G29740 | Projected from TAIR, homologous to LOC_Os01g10110 (CKX2/ Gn1a).Cytokinin oxidase/dehydrogenase 2 |
EIN3 | GeneProduct | tair.locus:AT3G20770 | Projected from TAIR, homologous to LOC_Os03g20780 (EIL1). |
PHD Zn-finger | GeneProduct | :LOC_Os11g12650 | |
AHOX | GeneProduct | :LOC_Os10g39030 | Associated with HOX family protein, expressed (UniProt Q8LN25)- Assigned as AHOX by Nemeth D and Hanumappa M (08/19/2010) |
SMT1 | GeneProduct | tair.locus:AT5G13710 | Projected from TAIR, homologous to LOC_Os07g10600 (Smt1-1).Cycloartenol-C24-methyltransferase |
SBE2.2 | GeneProduct | tair.locus:AT5G03650 | Projected from TAIR, homologous to LOC_Os02g32660 (SBEIIb).expression diminished during grain filling at high temperatures |
MTACP1 | GeneProduct | tair.locus:AT2G44620 | Projected from TAIR, homologous to LOC_Os07g12150 (Acyl carrier). |
FIB | GeneProduct | tair.locus:AT4G04020 | Projected from TAIR, homologous to LOC_Os09g04790 (Fibrillin). |
AT4G33150 | GeneProduct | tair.locus:AT4G33150 | Projected from TAIR, homologous to LOC_Os02g54254 (OsLKR). |
anac075 | GeneProduct | tair.locus:AT4G29230 | Projected from TAIR, homologous to LOC_Os01g09550 (NAC075). |
ATVDAC2 | GeneProduct | tair.locus:AT5G67500 | Projected from TAIR, homologous to LOC_Os03g10510 (VDAC5). |
LTPL109 | GeneProduct | :LOC_Os07g37385 | Extensin_2 |
NAS3 | GeneProduct | tair.locus:AT1G09240 | Projected from TAIR, homologous to LOC_Os03g19427 (NAS1).NA synthase gene 1 |
scpl40 | GeneProduct | tair.locus:AT3G63470 | Projected from TAIR, homologous to LOC_Os07g46350 (SCP40).Serine carboxypesidase |
BT3 | GeneProduct | tair.locus:AT1G05690 | Projected from TAIR, homologous to LOC_Os01g66890 (BTB-TAZ). |
AT1G14710 | GeneProduct | tair.locus:AT1G14710 | Projected from TAIR, homologous to LOC_Os03g13560 (HRGP).Hydroxyproline-rich glycoprotein family protein-UniPret ID |
YSL2 | GeneProduct | :LOC_Os02g43370 | yellow stripe 1-like |
RALF24 | GeneProduct | :LOC_Os11g26340 | Rapid ALkalinization Factor |
DUF584 | GeneProduct | :LOC_Os05g45450 | |
SUS6 | GeneProduct | tair.locus:AT1G73370 | Projected from TAIR, homologous to LOC_Os02g58480 (SuSy5).Sucrose synthase 5 |
LEC2 | GeneProduct | tair.locus:AT1G28300 | Projected from TAIR, homologous to LOC_Os08g01090 (IDEF1).IDE-binding factor 2 |
AtPHR1 | GeneProduct | tair.locus:AT4G28610 | Projected from TAIR, homologous to LOC_Os07g25710 (PSRR-L).Phosphate starvation response regulator |
AT1G80570 | GeneProduct | tair.locus:AT1G80570 | Projected from TAIR, homologous to LOC_Os12g33230 (FBL60).Leucine rich repeat |
CYP450 | GeneProduct | :LOC_Os09g10340 | |
Integrase | GeneProduct | :LOC_Os11g11694 | |
MADS 1 | GeneProduct | :LOC_Os03g11614 | Also called LHS1 |
AT5G53050 | GeneProduct | tair.locus:AT5G53050 | Projected from TAIR, homologous to LOC_Os02g19650 (Hydrolase ).Iron/ascorbate oxidoreductases |
PAKRP1L | GeneProduct | tair.locus:AT3G23670 | Projected from TAIR, homologous to LOC_Os04g28260 (Phragmoplast kinase). |
WRKY 55 | GeneProduct | :LOC_Os03g20550 | |
BMY1 | GeneProduct | tair.locus:AT4G15210 | Projected from TAIR, homologous to LOC_Os07g35940 (Bam 2). |
CYCA1;1 | GeneProduct | tair.locus:AT1G44110 | Projected from TAIR, homologous to LOC_Os01g13260 (CycA1-1). |
Retrotransposon | GeneProduct | :LOC_Os12g24050 | Sulfotransferase |
AT1G56560 | GeneProduct | tair.locus:AT1G56560 | Projected from TAIR, homologous to LOC_Os03g20020 (beta-fructofuranosidase).Neutral/alkaline invertase 1 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
AT1G22040 | GeneProduct | tair.locus:AT1G22040 | Projected from TAIR, homologous to LOC_Os10g21930 (FBK21).F-box domain and kelch repeat containing protein |
AGL19 | GeneProduct | tair.locus:AT4G22950 | Projected from TAIR, homologous to LOC_Os10g39130 (MADS 56). |
HSP70 | GeneProduct | :LOC_Os12g14070 | |
PP2A-4 | GeneProduct | tair.locus:AT3G58500 | Projected from TAIR, homologous to LOC_Os03g59060 (PP2A2). |
SUT3 | GeneProduct | :LOC_Os10g26470 | |
SSIV | GeneProduct | tair.locus:AT4G18240 | Projected from TAIR, homologous to LOC_Os05g45720 (SSIVb). |
CYP716A1 | GeneProduct | tair.locus:AT5G36110 | Projected from TAIR, homologous to LOC_Os07g33480 (taxane 10-beta-hydroxylase).Glutamate synthase cytochrome P450 domain containing protein |
AT5G25940 | GeneProduct | tair.locus:AT5G25940 | Projected from TAIR, homologous to LOC_Os06g05010 (ENOD93-1). |
AT1G30230 | GeneProduct | tair.locus:AT1G30230 | Projected from TAIR, homologous to LOC_Os07g42300 (EF-1-d1).EF-1B beta 1, EF-1-beta |
DPE2 | GeneProduct | tair.locus:AT2G40840 | Projected from TAIR, homologous to LOC_Os07g46790 (DPE2).Also called ALK |
AT1G63220 | GeneProduct | tair.locus:AT1G63220 | Projected from TAIR, homologous to LOC_Os04g44870 (ERG3).RPP16 |
ATARD2 | GeneProduct | tair.locus:AT4G14710 | Projected from TAIR, homologous to LOC_Os10g28350 (SIP2).1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 Ethylene induced |
AtAGAL2 | GeneProduct | tair.locus:AT5G08370 | Projected from TAIR, homologous to LOC_Os10g35110 (Gal1). |
EDM1 | GeneProduct | tair.locus:AT4G11260 | Projected from TAIR, homologous to LOC_Os01g43540 (SGT1).Responds to salicylic acid in chemically induced biotic response |
AT2G35900 | GeneProduct | tair.locus:AT2G35900 | Projected from TAIR, homologous to LOC_Os01g56470 (Mal d 1-AP). |
AT4G19810 | GeneProduct | tair.locus:AT4G19810 | Projected from TAIR, homologous to LOC_Os11g27400 (GlyH).Chitinase |
ABI3 | GeneProduct | tair.locus:AT3G24650 | Projected from TAIR, homologous to LOC_Os01g68370 (VP1).Interaction with Wsi18 and Lea3 by orthology to H vulgare ABA-related Seed dormancy Interaction with Wsi18 and Lea3 by orthology to H vulgare |
AT3G20800 | GeneProduct | tair.locus:AT3G20800 | Projected from TAIR, homologous to LOC_Os04g52340 (Rcd1-L).Also given LOC_Os07g37790 and LOC_Os03g57130 |
IAA9 | GeneProduct | :LOC_Os02g56120 | |
DET3 | GeneProduct | tair.locus:AT1G12840 | Projected from TAIR, homologous to LOC_Os05g51530 (vATP synthase C). |
GPT2-3 | GeneProduct | :LOC_Os07g33910 | |
OsPRP1 | GeneProduct | :LOC_Os10g05970 | Proline rich protein |
Amy2A | GeneProduct | :LOC_Os06g49970 | ABA-repressible and GA-inducible |
ATAF1 | GeneProduct | tair.locus:AT1G01720 | Projected from TAIR, homologous to LOC_Os01g66120 (SNAC2).ABA-related |
BT1-2 | GeneProduct | :LOC_Os02g10800 | |
PMA2 | GeneProduct | tair.locus:AT4G30190 | Projected from TAIR, homologous to LOC_Os04g56160 (Plasma membrane ATPase). |
BHLH039 | GeneProduct | tair.locus:AT3G56980 | Projected from TAIR, homologous to LOC_Os01g72370 (IRO2).basic/helix-loop-helix 56 |
AT4G32600 | GeneProduct | tair.locus:AT4G32600 | Projected from TAIR, homologous to LOC_Os02g54624 (ATP synthetase a). |
AT2G35840 | GeneProduct | tair.locus:AT2G35840 | Projected from TAIR, homologous to LOC_Os02g05030 (SPP2).sucrose-phosphatase 2 |
SEP3 | GeneProduct | tair.locus:AT1G24260 | Projected from TAIR, homologous to LOC_Os09g32948 (MADS 8).Also called MADS 24 |
SUS4 | GeneProduct | tair.locus:AT3G43190 | Projected from TAIR, homologous to LOC_Os06g09450 (SUS2).Sucrose synthase 2 |
Ubi | GeneProduct | :LOC_Os09g31031 | |
AGL6 | GeneProduct | tair.locus:AT2G45650 | Projected from TAIR, homologous to LOC_Os04g49150 (MADS17).Also called NMADS3 and RMADS213 |
C3H1 | GeneProduct | :LOC_Os01g07930 | Zinc finger CCCH domain-containing protein Glutaredoxin-related |
APL2 | GeneProduct | :LOC_Os01g44220 | ADP-glucose Pyrophosphorylase large subunit 2, binding only happens with APS2b SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF expression diminished during grain filling at high temperatures |
AT1G74240 | GeneProduct | tair.locus:AT1G74240 | Projected from TAIR, homologous to LOC_Os03g11510 (Mitrochondrial carrier). |
AT5G42740 | GeneProduct | tair.locus:AT5G42740 | Projected from TAIR, homologous to LOC_Os06g14510 (PGI-b). |
MADS 22 | GeneProduct | :LOC_Os02g52340 | Also called RMD1 |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os02g15090 (GluC). |
ISA1 | GeneProduct | tair.locus:AT2G39930 | Projected from TAIR, homologous to LOC_Os08g40930 (ISA1).expression diminished during grain filling at high temperatures |
E3-Ubi Ligase | GeneProduct | :LOC_Os05g47780 | |
DUF151 | GeneProduct | :LOC_Os01g50622 | |
PHS2 | GeneProduct | tair.locus:AT3G46970 | Projected from TAIR, homologous to LOC_Os01g63270 (PHOH).Also called ALK |
SUS4 | GeneProduct | tair.locus:AT3G43190 | Projected from TAIR, homologous to LOC_Os07g42490 (SUS3).Sucrose synthase 3 |
AT1G12760 | GeneProduct | tair.locus:AT1G12760 | Projected from TAIR, homologous to LOC_Os04g48050 (Ring ZF). |
ADG1 | GeneProduct | tair.locus:AT5G48300 | Projected from TAIR, homologous to LOC_Os08g25734 (APS2a).Also called AGPS2, ADP-glucose Pyrophosphorylase small subunit 2; SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF has two different transcripts= a:in leaf, b:in endosperm; binding with APL2 and Down regulation by RISBZ1 only happens with APS2b, binding with APL1 only happens with APS2a expression diminished during grain filling at high temperatures |
ATBETAFRUCT4 | GeneProduct | tair.locus:AT1G12240 | Projected from TAIR, homologous to LOC_Os04g45290 (Vin1). |
CIN4 | GeneProduct | :LOC_Os01g73580 | |
RB | GeneProduct | :LOC_Os01g39580 | seed coat color, endosperm color |
NAC4 | GeneProduct | :LOC_Os01g60020 | |
AP1 | GeneProduct | tair.locus:AT1G69120 | Projected from TAIR, homologous to LOC_Os07g01820 (MADS 15).Also called RAP1A |
ISA3 | GeneProduct | :LOC_Os09g29404 | |
AT1G70820 | GeneProduct | tair.locus:AT1G70820 | Projected from TAIR, homologous to LOC_Os06g28194 (phosphomannomutase).Soluble epoxide hydrolase |
CIN7 | GeneProduct | :LOC_Os09g08072 | |
ATDAD1 | GeneProduct | tair.locus:AT1G32210 | Projected from TAIR, homologous to LOC_Os04g32550 (DAD1).Defender against cell death 1 |
double-stranded beta-helix domain | GeneProduct | :LOC_Os11g06370 | |
AP3 | GeneProduct | tair.locus:AT3G54340 | Projected from TAIR, homologous to LOC_Os06g49840 (MADS 16). |
Bam 3 | GeneProduct | :LOC_Os07g35880 | |
AT1G77670 | GeneProduct | tair.locus:AT1G77670 | Projected from TAIR, homologous to LOC_Os09g28050 (IDI4).asparate aminotransferase |
UGP | GeneProduct | tair.locus:AT3G03250 | Projected from TAIR, homologous to LOC_Os02g02560 (UGP2 ). |
RPBF | GeneProduct | :LOC_Os02g15350 | Functionaly redundant and compensatory expression between RISBZI and RPBF except for OsLKR/SDH double KD mutant (KD-RISBZ1/KD-RPBF) caused most expression change |
SAL1 | GeneProduct | :LOC_Os06g43590 | |
ATAMY1 | GeneProduct | tair.locus:AT4G25000 | Projected from TAIR, homologous to LOC_Os08g36910 (Amy3D). |
AT1G11900 | GeneProduct | tair.locus:AT1G11900 | Projected from TAIR, homologous to LOC_Os05g40320 (PPR bZIP).Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
TyrK | GeneProduct | :LOC_Os11g15340 | SAM dependent carboxyl methyltransferase |
NFXL1 | GeneProduct | tair.locus:AT1G10170 | Projected from TAIR, homologous to LOC_Os06g14190 (LOC_Os06g14190). |
AT1G12840 | GeneProduct | tair.locus:AT1G60070 | Projected from TAIR, homologous to LOC_Os06g07090 (AP-1gamma-1). |
APS1 | GeneProduct | :LOC_Os09g12660 | ADP-glucose Pyrophosphorylase small subunit 1Â expression diminished during grain filling at high temperatures |
GRF7 | GeneProduct | tair.locus:AT3G02520 | Projected from TAIR, homologous to LOC_Os04g38870 (GF14b). |
ATAMY1 | GeneProduct | tair.locus:AT4G25000 | Projected from TAIR, homologous to LOC_Os02g52710 (Amy1A). |
RACK1A | GeneProduct | tair.locus:AT1G18080 | Projected from TAIR, homologous to LOC_Os01g49290 (RACK1A).Also called GPB-LR/ RWD |
APT1 | GeneProduct | tair.locus:AT1G27450 | Projected from TAIR, homologous to LOC_Os12g39860 (APT1).Adenine phosphoribosyltransferase 1 |
BMY8 | GeneProduct | tair.locus:AT4G17090 | Projected from TAIR, homologous to LOC_Os10g41550 (Bam 1). |
ATHB7 | GeneProduct | tair.locus:AT2G46680 | Projected from TAIR, homologous to LOC_Os09g35910 (HOX6).Cooper et al. 2003 called this leucine zipper and misnamed HOX 22 as HOX 6 (22834) |
WCRKC1 | GeneProduct | tair.locus:AT5G06690 | Projected from TAIR, homologous to LOC_Os02g53400 (TLR31).Translational repressor MPT5/PUF4 |
AT3G29320 | GeneProduct | tair.locus:AT3G29320 | Projected from TAIR, homologous to LOC_Os03g55090 (PHOL ). |
AT2G36950 | GeneProduct | tair.locus:AT2G36950 | Projected from TAIR, homologous to LOC_Os10g30450 (LOC_Os10g30450 ).Unknown-UniProt ID |
ADG2 | GeneProduct | tair.locus:AT5G19220 | Projected from TAIR, homologous to LOC_Os03g52460 (APL3). |
Sci2 | GeneProduct | :LOC_Os01g42860 | |
PSBC | GeneProduct | tair.locus:ATCG00280 | Projected from TAIR, homologous to LOC_Os02g24632 (psbC ). |
b-1,3-Glucanase | GeneProduct | :LOC_Os03g25790 | |
ICL | GeneProduct | tair.locus:AT3G21720 | Projected from TAIR, homologous to LOC_Os07g34520 (Isocitrate lyase). |
AGL44 | GeneProduct | tair.locus:AT2G14210 | Projected from TAIR, homologous to LOC_Os02g49840 (MADS 57). |
NFU4 | GeneProduct | tair.locus:AT3G20970 | Projected from TAIR, homologous to LOC_Os05g06330 (LOC_Os05g06330). |
ENODL9 | GeneProduct | tair.locus:AT3G20570 | Projected from TAIR, homologous to LOC_Os06g46740 (PUP2). |
Oryzain gamma Protease | GeneProduct | :LOC_Os09g27030 | |
AT1G57720 | GeneProduct | tair.locus:AT1G57720 | Projected from TAIR, homologous to LOC_Os02g12800 (EF-1-g).eEF-1G |
BZO2H4 | GeneProduct | tair.locus:AT3G54620 | Projected from TAIR, homologous to LOC_Os07g08420 (RISBZ1).Functionaly redundant and compensatory expression between RISBZI and RPBF. Double Knock-Down mutant (KD-RISBZ1/KD-RPBF) caused most expression change in OsLKR/SDH |
UBP23 | GeneProduct | tair.locus:AT5G57990 | Projected from TAIR, homologous to LOC_Os06g08530 (bip110).Putative ubiquitin-specific protease 23, BRI1-KD interacting protein 110 |
SUT2 | GeneProduct | tair.locus:AT2G02860 | Projected from TAIR, homologous to LOC_Os02g58080 (SUT4). |
Flavin containing monooxygenase 3-like | GeneProduct | :LOC_Os09g37620 | Serine/threonine protein kinase |
Ghd7 | GeneProduct | :LOC_Os07g15770 | yield potential |
AT3G15670 | GeneProduct | tair.locus:AT3G15670 | Projected from TAIR, homologous to LOC_Os01g50910 (Wsi18).Interaction with TRAB1 and VP1 by orthology to H vulgare ABA and GA induced water stress + cold stress member of the group 3 Lea family Wsi18 promoter is active in the whole grain |
PGI1 | GeneProduct | tair.locus:AT4G24620 | Projected from TAIR, homologous to LOC_Os09g29070 (PGI-a). |
Wx1 | GeneProduct | :LOC_Os06g04200 | 30% less pre-mRNA in du1 mutant line Granule-bound starch synthase expression diminished during grain filling at high temperatures |
AT1G06890 | GeneProduct | tair.locus:AT1G06890 | Projected from TAIR, homologous to LOC_Os05g07670 (GPT-A).Assigned as GPT-A by Nemeth D and Hanumappa M (10/21/2010) |
AP1 | GeneProduct | tair.locus:AT1G69120 | Projected from TAIR, homologous to LOC_Os03g54160 (MADS 14).Also called AGL10, RAP1B |
ABI5 | GeneProduct | tair.locus:AT2G36270 | Projected from TAIR, homologous to LOC_Os01g64000 (ABI5). |
ATXDH1 | GeneProduct | tair.locus:AT4G34890 | Projected from TAIR, homologous to LOC_Os03g31550 (AOXDH). |
AT4G17100 | GeneProduct | tair.locus:AT4G17100 | Projected from TAIR, homologous to LOC_Os04g45910 (Serine protease).Os04g0542900, |
AT2G36950 | GeneProduct | tair.locus:AT2G36950 | Projected from TAIR, homologous to LOC_Os03g05750 (VP2-like). |
RAR1 | GeneProduct | tair.locus:AT5G51700 | Projected from TAIR, homologous to LOC_Os02g33180 (RAR1). |
SUT1 | GeneProduct | :LOC_Os03g07480 | |
AT1G55550 | GeneProduct | tair.locus:AT1G55550 | Projected from TAIR, homologous to LOC_Os01g15540 (Flavin-containing monooxygenase). |
CSN5A | GeneProduct | tair.locus:AT1G22920 | Projected from TAIR, homologous to LOC_Os04g56070 (CSN5). |
PROLM 24 | GeneProduct | :LOC_Os06g31070 | 16 kDa Prolamin |
IMPA-2 | GeneProduct | tair.locus:AT4G16143 | Projected from TAIR, homologous to LOC_Os01g14950 (Importin alpha-1a).NLS RECEPTOR |
APRL4 | GeneProduct | tair.locus:AT1G34780 | Projected from TAIR, homologous to LOC_Os02g51850 (APRL3).Disulfide Isomerase |
Rac | GeneProduct | :LOC_Os01g12900 | |
AT2G25220 | GeneProduct | tair.locus:AT2G25220 | Projected from TAIR, homologous to LOC_Os02g08530 (LOC_Os02g08530).Protein Kinase-UniProt ID |
PAT1 | GeneProduct | tair.locus:AT5G17990 | Projected from TAIR, homologous to LOC_Os03g03450 (Anthranilate Phosphoribosyltransferase). |
ATAMY1 | GeneProduct | tair.locus:AT4G25000 | Projected from TAIR, homologous to LOC_Os09g28420 (Amy3B/Amy3C). |
STA1 | GeneProduct | tair.locus:AT4G03430 | Projected from TAIR, homologous to LOC_Os10g35550 (Du1).dull endosperm-1 |
AT2G39300 | GeneProduct | tair.locus:AT2G39300 | Projected from TAIR, homologous to LOC_Os03g20580 (Centromere protein). |
PIP5K9 | GeneProduct | tair.locus:AT3G09920 | Projected from TAIR, homologous to LOC_Os02g57660 (PIP5K).Putative phosphatidylinositol-4-phosphate 5-kinase |
BZO2H4 | GeneProduct | tair.locus:AT3G54620 | Projected from TAIR, homologous to LOC_Os03g58250 (REB ).Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
AT3G15670 | GeneProduct | tair.locus:AT3G15670 | Projected from TAIR, homologous to LOC_Os05g46480 (Lea3).Interaction with TRAB1 and VP1 by orthology to H vulgare ABA related |
DPK4 | GeneProduct | :LOC_Os06g45300 | Ser/thr/tyr kinase |
CRP | GeneProduct | tair.locus:AT4G00450 | Projected from TAIR, homologous to LOC_Os10g40260 (LOC_Os10g40260 ). |
Luc7-like 2 | GeneProduct | :LOC_Os03g62640 | Sarcoplasmic reticulum |
Jasmonate-induced protein | GeneProduct | :LOC_Os12g09700 | Histone H3 (Lys9) methyltransferase |
EM6 | GeneProduct | tair.locus:AT2G40170 | Projected from TAIR, homologous to LOC_Os05g28210 (OsEM). |
SBEIIa | GeneProduct | :LOC_Os04g33460 | expression diminished during grain filling at high temperatures |
AT4G03500 | GeneProduct | tair.locus:AT4G03500 | Projected from TAIR, homologous to LOC_Os09g17329 (Ankyrin-like protein).Iron transporter |
ATBETAFRUCT4 | GeneProduct | tair.locus:AT1G12240 | Projected from TAIR, homologous to LOC_Os02g01590 (Vin 2). |
BMY3 | GeneProduct | tair.locus:AT5G18670 | Projected from TAIR, homologous to LOC_Os03g22790 (Bam 10). |
FBA2 | GeneProduct | tair.locus:AT4G38970 | Projected from TAIR, homologous to LOC_Os11g07020 (ALDP).Aldolase |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os01g55690 (GluA-1). |
RCA | GeneProduct | tair.locus:AT2G39730 | Projected from TAIR, homologous to LOC_Os11g47970 (RCAA1).RuBisCO activase large isoform |
PPDK | GeneProduct | tair.locus:AT4G15530 | Projected from TAIR, homologous to LOC_Os05g33570 (PPDKB).CPDK1, PPDKB |
PSAD-1 | GeneProduct | tair.locus:AT4G02770 | Projected from TAIR, homologous to LOC_Os08g44680 (PSI-D). |
SSIV | GeneProduct | tair.locus:AT4G18240 | Projected from TAIR, homologous to LOC_Os01g52250 (SSIVa).Also called ALK |
AT2G17550 | GeneProduct | tair.locus:AT2G17550 | Projected from TAIR, homologous to LOC_Os03g03860 (LOC_Os03g03860).Unknown-UniProt ID |
PBZ1 | GeneProduct | :LOC_Os12g36880 | |
AT1G47640 | GeneProduct | tair.locus:AT1G47640 | Projected from TAIR, homologous to LOC_Os03g55730 (SSA2 ).10 kDa prolamin precursor |
AT3G29130 | GeneProduct | tair.locus:AT3G29130 | Projected from TAIR, homologous to LOC_Os03g43910 ( LOC_Os03g43910). |
MADS 5 | GeneProduct | :LOC_Os06g06750 | |
GLN1;1 | GeneProduct | tair.locus:AT5G37600 | Projected from TAIR, homologous to LOC_Os02g50240 (GLN1-1).Glutamine synthetase cytosolic isozyme 1-1, also called RGS28 and GS1;1 |
MPK5 | GeneProduct | :LOC_Os03g17700 | UniProt:MPK3, BIMK1, MAP3, MAPK2, MPK5 |
GCPE | GeneProduct | tair.locus:AT5G60600 | Projected from TAIR, homologous to LOC_Os02g39160 (HDS1).4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1 |
SCL8 | GeneProduct | tair.locus:AT5G52510 | Projected from TAIR, homologous to LOC_Os02g45760 (SCR-like).Scarecrow transcriptional regulator-like protein |
CYP76C2 | GeneProduct | tair.locus:AT2G45570 | Projected from TAIR, homologous to LOC_Os10g08474 (CYP450 ).AP2 transcription factor |
TRAB1 | GeneProduct | :LOC_Os08g36790 | Interaction with Wsi18 and Lea3 by orthology to H vulgare bZIP transcription factor TRAB1, ABA RESPONSIVE ELEMENT 1=ABA1 |
YSL15 | GeneProduct | :LOC_Os02g43410 | YELLOW STRIPE LIKE 15 |
IREG2 | GeneProduct | tair.locus:AT5G03570 | Projected from TAIR, homologous to LOC_Os06g36450 (ferroportin1). |
LOC_Os03g55130 | GeneProduct | :LOC_Os03g55130 | |
BMY2 | GeneProduct | tair.locus:AT5G45300 | Projected from TAIR, homologous to LOC_Os02g03690 (Bam 9). |
PSAK | GeneProduct | tair.locus:AT1G30380 | Projected from TAIR, homologous to LOC_Os07g05480 (Photosystem I RC subunit ). |
SSI1 | GeneProduct | tair.locus:AT5G24300 | Projected from TAIR, homologous to LOC_Os06g06560 (SSI). |
EXPB2 | GeneProduct | :LOC_Os10g40710 | |
AT3G05500 | GeneProduct | tair.locus:AT3G05500 | Projected from TAIR, homologous to LOC_Os07g47510 (Stress-related protein). |
Bam 8 | GeneProduct | :LOC_Os01g13550 | |
PLC2 | GeneProduct | tair.locus:AT3G08510 | Projected from TAIR, homologous to LOC_Os07g49330 (Phospholipase C). |
SUT5 | GeneProduct | :LOC_Os02g36700 | |
At-A/N-InvE | GeneProduct | tair.locus:AT5G22510 | Projected from TAIR, homologous to LOC_Os02g32730 (INV3).Neutral/alkaline invertase 3 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
AT5G05010 | GeneProduct | tair.locus:AT5G05010 | Projected from TAIR, homologous to LOC_Os01g61710 (Delta-COP).Delta coatamer |
SSII-2 | GeneProduct | :LOC_Os02g51070 | Also called ALK |
Terpene cyclases | GeneProduct | :LOC_Os04g27190 | |
MCM2 | GeneProduct | tair.locus:AT1G44900 | Projected from TAIR, homologous to LOC_Os11g29380 (MCM2). |
RAB18 | GeneProduct | tair.locus:AT5G66400 | Projected from TAIR, homologous to LOC_Os11g26790 (Rab21).ABA related water stress + cold stress |
TCH2 | GeneProduct | tair.locus:AT5G37770 | Projected from TAIR, homologous to LOC_Os05g13580 (CML18). |
GRF7 | GeneProduct | tair.locus:AT3G02520 | Projected from TAIR, homologous to LOC_Os08g33370 (GF14c). |
UGP | GeneProduct | tair.locus:AT3G03250 | Projected from TAIR, homologous to LOC_Os09g38030 (UGP1 ). |
ATGSNOR1 | GeneProduct | tair.locus:AT5G43940 | Projected from TAIR, homologous to LOC_Os02g57040 (FDH).Alcohol dehydrogenase class 3; Also called FALDH, GSH-FDH (Glutathione-dependent formaldehyde dehydrogenase) |
AT3G01490 | GeneProduct | tair.locus:AT3G01490 | Projected from TAIR, homologous to LOC_Os05g50190 (LOC_Os05g50190).Protein Kinase-UniProt ID |
ELF9 | GeneProduct | tair.locus:AT5G16260 | Projected from TAIR, homologous to LOC_Os04g41910 (LOC_Os04g41910). |
AT5G53390 | GeneProduct | tair.locus:AT5G53390 | Projected from TAIR, homologous to LOC_Os05g48260 (RIR 1b). |
SSP5 | GeneProduct | tair.locus:AT5G11860 | Projected from TAIR, homologous to LOC_Os07g10690 (CPL1).Seed Shattering |
FKF1 | GeneProduct | tair.locus:AT1G68050 | Projected from TAIR, homologous to LOC_Os11g34460 (FBO10).Adagio-like protein 3 Cytochrome P450 |
AT1G77060 | GeneProduct | tair.locus:AT1G77060 | Projected from TAIR, homologous to LOC_Os12g08760 (OsCCP ).Assigned as OsCCP by Nemeth D and Hanumappa M (10/21/2010) carboxyvinyl-carboxyphosphonate phosphorylmutase |
JA cmtr | GeneProduct | :LOC_Os06g22440 | Putative S-adenosyl-L-methionine Subtilisin N-terminal Region |
ISA2 | GeneProduct | tair.locus:AT1G03310 | Projected from TAIR, homologous to LOC_Os05g32710 (ISA2). |
BMY9 | GeneProduct | tair.locus:AT4G00490 | Projected from TAIR, homologous to LOC_Os09g39570 (Bam 6). |
PROLM28 | GeneProduct | :LOC_Os12g16890 | Prolamin precursor, protein also called PPROL 17 |
PUM8 | GeneProduct | tair.locus:AT1G22240 | Projected from TAIR, homologous to LOC_Os12g31000 (Pumilio ).Leucine rich repeat |
ZIP10 | GeneProduct | tair.locus:AT1G31260 | Projected from TAIR, homologous to LOC_Os03g46470 (IRT1). |
ATOPT3 | GeneProduct | tair.locus:AT4G16370 | Projected from TAIR, homologous to LOC_Os03g54000 (Oligopeptide transporter 3).Isp4-like |
AT5G49710 | GeneProduct | tair.locus:AT5G49710 | Projected from TAIR, homologous to LOC_Os02g54080 (MADS-box IL). |
AT4G32260 | GeneProduct | tair.locus:AT4G32260 | Projected from TAIR, homologous to LOC_Os03g17070 (ATP synthase). |
CRU1 | GeneProduct | tair.locus:AT5G44120 | Projected from TAIR, homologous to LOC_Os02g15169 (GluB-1A).UniProt ID: P14323 |
MLA10 | GeneProduct | :LOC_Os11g16470 | Ankyrin repeat |
RPK-TMK1 precursor | GeneProduct | :LOC_Os04g58910 | receptor protein kinase TMK1 precursor |
PI | GeneProduct | tair.locus:AT5G20240 | Projected from TAIR, homologous to LOC_Os01g66030 (MADS 2). |
AT1G67890 | GeneProduct | tair.locus:AT1G67890 | Projected from TAIR, homologous to LOC_Os12g37570 (LOC_Os12g37570).Protein Kinase-UniProt ID |
DIP1 | GeneProduct | :LOC_Os05g34070 | |
EBP89 | GeneProduct | :LOC_Os03g08460 | Also called EREBP1 |
SUT4 | GeneProduct | tair.locus:AT1G09960 | Projected from TAIR, homologous to LOC_Os12g44380 (SUT2). |
CYCB1;2 | GeneProduct | tair.locus:AT5G06150 | Projected from TAIR, homologous to LOC_Os01g59120 (CycB1;1).Seed Shattering |
AT2G35840 | GeneProduct | tair.locus:AT2G35840 | Projected from TAIR, homologous to LOC_Os01g27880 (SPP1).sucrose-phosphatase 1 |
AT4G24060 | GeneProduct | tair.locus:AT4G24060 | Projected from TAIR, homologous to LOC_Os04g47990 (S-REP ). |
UNE10 | GeneProduct | tair.locus:AT4G00050 | Projected from TAIR, homologous to LOC_Os10g40740 (bhlh113).basic/helix-loop-helix 113 |
APL1 | GeneProduct | :LOC_Os05g50380 | ADP-glucose Pyrophosphorylase large subunit 1 |
CTR1-like | GeneProduct | :LOC_Os09g39320 | Multitransmembrane protein |
DREB1B | GeneProduct | :LOC_Os09g35010 | |
RUBQ1 | GeneProduct | :LOC_Os02g06640 | Also called Polyubiquitin 6 Also given LOC_Os05g42424 which is not complete |
ALDH11A3 | GeneProduct | tair.locus:AT2G24270 | Projected from TAIR, homologous to LOC_Os08g34210 (NADPH G-3-P dh). |
AT1G27461 | GeneProduct | tair.locus:AT1G27461 | Projected from TAIR, homologous to LOC_Os07g39700 (Sdr4). |
AT1G76660 | GeneProduct | tair.locus:AT1G76660 | Projected from TAIR, homologous to LOC_Os01g01390 (Ring Finger). |
SS2 | GeneProduct | tair.locus:AT3G01180 | Projected from TAIR, homologous to LOC_Os10g30156 (SSIIc).Also called ALK |
AT2G42130 | GeneProduct | tair.locus:AT2G42130 | Projected from TAIR, homologous to LOC_Os04g57020 (LOC_Os04g57020). |
PSBO2 | GeneProduct | tair.locus:AT3G50820 | Projected from TAIR, homologous to LOC_Os01g31690 (PSII-OEP33).No symbol in gramene so OEP33 was assigned. 33kDa oxygen evolving protein of photosystem II |
LOC_Os04g53350 | GeneProduct | :LOC_Os04g53350 | Cooper 31122 ID |
CRINKLY4 | GeneProduct | :LOC_Os08g28710 | |
RAG-1 | GeneProduct | :LOC_Os09g16260 | RISBZ1 + RPBF activated the RAG-1 promoter greater than RPBF alone, though RISBZ1 did not independently affect promoter activity |
CR4 | GeneProduct | tair.locus:AT3G59420 | Projected from TAIR, homologous to LOC_Os03g43670 (CR4).homology with Crinkly4 |
SSA1 | GeneProduct | :LOC_Os05g41970 | 26 kDa alpha globulin |
APG2 | GeneProduct | tair.locus:AT2G01110 | Projected from TAIR, homologous to LOC_Os01g31680 (TATC). |
DPE1 | GeneProduct | tair.locus:AT5G64860 | Projected from TAIR, homologous to LOC_Os07g43390 (DPE1). |
LOC_Os02g53890 | GeneProduct | :LOC_Os02g53890 |
References
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