Isoleucine degradation (WP178)
Saccharomyces cerevisiae
While Saccharomyces cerevisiae can use most amino acids as their sole nitrogen source, they can only use a few amino acids as a carbon source to support growth. This is in contrast to most eukaryotes and some fungi, which can metabolize amino acids completely, utilizing them as sole sources of carbon and nitrogen. S. cerevisiae degrade the branched-chain amino acids (iso-leucine, leucine, and valine) and the aromatic amino acids (tryptophan, phenylalanine, and tyrosine) via the Ehrlich pathway. This pathway is comprised of the following steps: 1) deamination of the amino acid to the corresponding alpha-keto acid; 2) decarboxylation of the resulting alpha-keto acid to the respective aldehyde; and, 3) reduction of the aldehyde to form the corresponding long chain or complex alcohol, known as a fusel alcohol or fusel oil. Fusel alcohols are important flavor and aroma compounds in yeast-fermented food products and beverages Each of the three steps in branched-chain amino acid degradation can be catalyzed by more than one isozyme; which enzyme is used appears to depend on the amino acid, the carbon source and the stage of growth of the culture. The initial transamination step in iso-leucine degradation can be catalyzed by either of the branched-chain amino acid transaminases BAT1 (mitochondrial) or BAT2 (cytosolic). The subsequent decarboxylation step can be catalyzed by any one of the five decarboxylases (Pdc1p, Pdc5p, Pdc6p, Thi3p, and Aro10p) and the final step can be catalyzed by any one of six alcohol dehydrogenases (Adh1p, Adh2p, Adh3p, Adh4p, Adh5p, and Sfa1p). SOURCE: SGD pathways, http://pathway.yeastgenome.org/server.html
Authors
Jessica Heckman , Daniela Digles , Egon Willighagen , Eric Weitz , and Kristina HanspersActivity
Discuss this pathway
Check for ongoing discussions or start your own.
Cited In
Are you planning to include this pathway in your next publication? See How to Cite and add a link here to your paper once it's online.
Organisms
Saccharomyces cerevisiaeCommunities
Annotations
Pathway Ontology
classic metabolic pathway isoleucine degradation pathwayLabel | Type | Compact URI | Comment |
---|---|---|---|
L-isoleucine | Metabolite | chebi:58045 | |
2-methylbutanal | Metabolite | chebi:16182 | |
NAD+ | Metabolite | chebi:57540 | |
NADH | Metabolite | chebi:57945 | |
L-glutamate | Metabolite | cas:56-86-0 | |
H+ | Metabolite | chebi:15378 | |
2-oxoglutarate | Metabolite | chebi:16810 | |
2-methylbutanol | Metabolite | chebi:48945 | |
CO2 | Metabolite | chebi:16526 | |
(S)-3-methyl-2-oxopentanoate | Metabolite | chebi:35146 | |
BAT2 | GeneProduct | sgd:S000003909 | |
BAT1 | GeneProduct | sgd:S000001251 | |
PDC1 | GeneProduct | sgd:S000004034 | |
THI3 | GeneProduct | sgd:S000002238 | |
ARO10 | GeneProduct | sgd:S000002788 | |
PDC6 | GeneProduct | sgd:S000003319 | |
PDC5 | GeneProduct | sgd:S000004124 | |
SFA1 | GeneProduct | ensembl:YDL168W | |
ADH5 | GeneProduct | ensembl:YBR145W | |
ADH4 | GeneProduct | ensembl:YGL256W |
References
- Two yeast homologs of ECA39, a target for c-Myc regulation, code for cytosolic and mitochondrial branched-chain amino acid aminotransferases. Eden A, Simchen G, Benvenisty N. J Biol Chem. 1996 Aug 23;271(34):20242–5. PubMed Europe PMC Scholia
- Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein. Kispal G, Steiner H, Court DA, Rolinski B, Lill R. J Biol Chem. 1996 Oct 4;271(40):24458–64. PubMed Europe PMC Scholia
- An investigation of the metabolism of isoleucine to active Amyl alcohol in Saccharomyces cerevisiae. Dickinson JR, Harrison SJ, Dickinson JA, Hewlins MJ. J Biol Chem. 2000 Apr 14;275(15):10937–42. PubMed Europe PMC Scholia
- Branched-chain-amino-acid transaminases of yeast Saccharomyces cerevisiae. Prohl C, Kispal G, Lill R. Methods Enzymol. 2000;324:365–75. PubMed Europe PMC Scholia
- URL: https://pathway.yeastgenome.org/YEAST/NEW-IMAGE?type=PATHWAY&object=PWY3O-4109