Glycolysis (WP2621)
Arabidopsis thaliana
This pathway describes Glycolysis reactions in A. thaliana. The metabolic links with Sucrose metabolism, starch metabolism, Calvin Cycle, TCA Cycle (Krebs Cycle) and Chloroplastic Amino Acid Biosynthesis are represented. Protein identifiers for A. thaliana are from UNIPROT. The pathway is inspired from information drawn for Plant Physiology (Taiz and Zeiger) Third Edition and KEGG Pathways.
Authors
Anwesha Bohler , Sacha Bohler , Egon Willighagen , Martina Summer-Kutmon , and Lars WillighagenActivity
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Organisms
Arabidopsis thalianaCommunities
Annotations
Pathway Ontology
glycolysis pathway| Label | Type | Compact URI | Comment |
|---|---|---|---|
| glycerate 1,3-bisphosphate | Metabolite | chebi:16001 | |
| glucose | Metabolite | hmdb:HMDB0000122 | |
| fructose 1,6-bisphosphate | Metabolite | hmdb:HMDB0001058 | |
| glycerate 3-phosphate | Metabolite | chebi:58272 | |
| glycerate 2-phosphate | Metabolite | chebi:58289 | |
| NAD+ | Metabolite | hmdb:HMDB0000902 | |
| PPi | Metabolite | chebi:35782 | |
| glucose 6-phosphate | Metabolite | hmdb:HMDB0001401 | |
| fructose 6-phosphate | Metabolite | hmdb:HMDB0000124 | |
| NADH | Metabolite | hmdb:HMDB0001487 | |
| oxaloacetate | Metabolite | chebi:16452 | |
| phosphoenolpyruvate | Metabolite | kegg.compound:C00074 | |
| pyruvate | Metabolite | chebi:15361 | |
| malate | Metabolite | chebi:15595 | |
| Dihydroxyacetone phosphate | Metabolite | hmdb:HMDB0001473 | |
| glyceraldahyde-3-phosphate | Metabolite | kegg.compound:C00118 | |
| ATP | Metabolite | hmdb:HMDB0000538 | |
| ADP | Metabolite | chebi:16761 | |
| Pi | Metabolite | chebi:18367 | |
| NADPH | Metabolite | hmdb:HMDB0000221 | |
| NADP+ | Metabolite | hmdb:HMDB0000217 | |
| fructose 1,6-bisphosphate aldolase | Protein | uniprot:P22197 | |
| phosphoglycerate kinase | Protein | uniprot:Q9SAJ4 | |
| glucose-6-phosphate isomerase | Protein | uniprot:P34795 | |
| triose phosphate isomerase | Protein | uniprot:P48491 | |
| hexokinase 2 | Protein | uniprot:P93834 | |
| PPi-dependent phosphofructokinase beta 1 | Protein | uniprot:Q8W4M5 | |
| PPi-dependent phosphofructokinase beta 2 | Protein | uniprot:F4JGR5 | |
| PPi-dependent phosphofructokinase alpha 1 | Protein | uniprot:Q9SYP2 | |
| PPi-dependent phosphofructokinase alpha 2 | Protein | uniprot:Q9C9K3 | |
| ATP-dependent phosphofructokinase 1 | Protein | uniprot:Q9M0F9 | |
| ATP-dependent phosphofructokinase 2 | Protein | uniprot:Q9FIK0 | |
| ATP-dependent phosphofructokinase 3 | Protein | uniprot:Q94AA4 | |
| ATP-dependent phosphofructokinase 6 | Protein | uniprot:Q9M076 | |
| ATP-dependent phosphofructokinase 7 | Protein | uniprot:Q9C5J7 | |
| glyceraldehyde 3-phosphate dehydrogenase 1 | Protein | uniprot:P25858 | |
| glyceraldehyde 3-phosphate dehydrogenase 2 | Protein | uniprot:Q9FX54 | |
| phosphoglycerate mutase 1 | Protein | uniprot:O04499 | |
| phosphoglycerate mutase 2 | Protein | uniprot:Q9M9K1 | |
| enolase 2 | Protein | uniprot:P25696 | |
| enolase 3 | Protein | uniprot:Q9ZW34 | |
| phosphoenolpyruvate carboxylase 4 | Protein | uniprot:Q8GVE8 | |
| phosphoenolpyruvate carboxylase 2 | Protein | uniprot:Q5GM68 | |
| phosphoenolpyruvate carboxylase 1 | Protein | uniprot:Q9MAH0 | |
| phosphoenolpyruvate carboxylase 3 | Protein | uniprot:Q84VW9 | |
| malate dehydrogenase 2 | Protein | uniprot:P57106 | |
| malate dehydrogenase 1 | Protein | uniprot:P93819 | |
| malic enzyme 1 | Protein | uniprot:O82191 | |
| malic enzyme 2 | Protein | uniprot:Q9LYG3 | |
| malic enzyme 3 | Protein | uniprot:Q9XGZ0 | |
| pyruvate kinase | Protein | uniprot:Q9FFP6 | |
| pyruvate kinase | Protein | uniprot:Q9LU95 | |
| pyruvate kinase | Protein | uniprot:Q9FNN1 | |
| pyruvate kinase | Protein | uniprot:Q9SQQ7 | |
| pyruvate kinase | Protein | uniprot:Q9M044 | |
| pyruvate kinase | Protein | uniprot:Q9M057 | |
| pyruvate kinase | Protein | uniprot:Q9SJQ0 | |
| pyruvate kinase | Protein | uniprot:Q94KE3 |
References
- Plant Physiology [Internet]. Taiz L, Zeiger E. Sinauer Associates Incorporated; 2002. 690 p. Available from: https://books.google.com/books/about/Plant_Physiology.html?hl=&id=u_BOQgAACAAJ OpenLibrary Worldcat
- Expression and evolutionary features of the hexokinase gene family in Arabidopsis. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, et al. Planta. 2008 Aug;228(3):411–25. PubMed Europe PMC Scholia