Escherichia coli K-12 peripherome (WP2472)
Escherichia coli
This is a schematic longitudinal section of an E. coli cell. A section of the inner membrane is depicted; the rest of the cell envelope is omitted for simplicity. Based on MultiFun classification Peripheral Inner Membrane proteins (PIM proteins, green circles) participate in 9 cellular processes (indicated with bold letters): cell structure; DNA-, RNA- and protein related; metabolism; transport; response to stress and cell division. Sub-categories of these processes are indicated with bold grey letters. The proteins are grouped according to known complexes (encircled in gray color schemes) and pathways, together with their integral inner membrane partners (yellow circles) where known (Keseler, I.M. [2009]). Protein-protein interactions derived from tandem-affinity purification experiments (Aranda, B et al [2010]) are also mapped (where available) and depicted with connecting lines. For visualization purposes the protein-protein interactions were integrated and loaded in Cytoscape (Keseler, I.M. [2009]).
For a description of pathway objects, see the WikiPathways Legend.
Authors
Economou Lab , Susan Coort , Egon Willighagen , and Eric WeitzActivity
Discuss this pathway
Check for ongoing discussions or start your own.
Cited In
Are you planning to include this pathway in your next publication? See How to Cite and add a link here to your paper once it's online.
Organisms
Escherichia coliCommunities
Annotations
Pathway Ontology
classic metabolic pathway regulatory pathway signaling pathway| Label | Type | Compact URI | Comment |
|---|---|---|---|
| IhfB | Protein | uniprot:P0A6Y1 | |
| IhfA | Protein | uniprot:P0A6X7 | |
| HflC | Protein | uniprot:P0ABC3 | |
| HflK | Protein | uniprot:P0ABC7 | |
| YccA | Protein | uniprot:P0AAC6 | |
| FtsH | Protein | uniprot:P0AAI3 | |
| LptA | Protein | uniprot:P0ADV1 | |
| LptG | Protein | uniprot:P0ADC6 | |
| LptF | Protein | uniprot:P0AF98 | |
| LptC | Protein | uniprot:P0ADV9 | |
| MsbA | Protein | uniprot:P60752 | |
| KdtA | Protein | uniprot:P0AC75 | |
| LptB | Protein | uniprot:P0A9V1 | |
| RfaL | Protein | uniprot:P27243 | |
| RfaF | Protein | uniprot:P37692 | |
| RfaP | Protein | uniprot:P25741 | |
| RfaQ | Protein | uniprot:P25742 | |
| RfaC | Protein | uniprot:P24173 | |
| ArnC | Protein | uniprot:P77757 | |
| ArnT | Protein | uniprot:P76473 | |
| ArnD | Protein | uniprot:P76472 | |
| ArnA | Protein | uniprot:P77398 | |
| WecA | Protein | uniprot:P0AC78 | |
| WecG | Protein | uniprot:P27836 | |
| MsbB | Protein | uniprot:P24205 | |
| HtrB | Protein | uniprot:P0ACV0 | |
| GlpD | Protein | uniprot:P13035 | |
| WbbK | Protein | uniprot:P37751 | |
| PbpA | Protein | uniprot:P02918 | |
| UppP | Protein | uniprot:P60932 | |
| FtsN | Protein | uniprot:P29131 | |
| LpxB | Protein | uniprot:P10441 | |
| LpoA | Protein | uniprot:P45464 | |
| MukB | Protein | uniprot:P27836 | |
| Pbp2 | Protein | uniprot:P0AD65 | |
| YidC | Protein | uniprot:P25714 | |
| MurG | Protein | uniprot:P17443 | |
| Dld | Protein | uniprot:P06149 | |
| DadA | Protein | uniprot:P0A6J5 | |
| DbhA | Protein | uniprot:P0ACF0 | |
| PstB | Protein | uniprot:P0AAH0 | |
| PflB | Protein | uniprot:P09373 | |
| FtsZ | Protein | uniprot:P0AEZ3 | |
| FtsE | Protein | uniprot:P0A9R7 | |
| FtsA | Protein | uniprot:P0ABH0 | |
| Add | Protein | uniprot:P22333 | |
| YjgR | Protein | uniprot:P39342 | |
| YifE | Protein | uniprot:P0ADN2 | |
| MinE | Protein | uniprot:P0A734 | |
| MinC | Protein | uniprot:P18196 | |
| MinD | Protein | uniprot:P0AEZ3 | |
| PyrG | Protein | uniprot:P0A7E5 | |
| IspG | Protein | uniprot:P62620 | |
| RodZ | Protein | uniprot:P0A9X4 | |
| YbbP | Protein | uniprot:P77504 | |
| MreB | Protein | uniprot:P0A9X4 | |
| MreD | Protein | uniprot:P0ABH4 | |
| MreC | Protein | uniprot:P16926 | |
| PlsC | Protein | uniprot:P26647 | |
| Pss | Protein | uniprot:P23830 | |
| YbjX | Protein | uniprot:P75829 | |
| PhoL | Protein | uniprot:P0A9K3 | |
| YbgC | Protein | uniprot:P0A8Z3 | |
| AccA | Protein | uniprot:P0ABD5 | |
| Ppx | Protein | uniprot:P0AFL6 | |
| OpgH | Protein | uniprot:P62517 | |
| PlsB | Protein | uniprot:P0A7A7 | |
| Psd | Protein | uniprot:P0A8K1 | |
| Aas | Protein | uniprot:P31119 | |
| Kbl | Protein | uniprot:P0AB77 | |
| FabZ | Protein | uniprot:P0A6Q6 | |
| PlsX | Protein | uniprot:P27247 | |
| RlmH | Protein | uniprot:P0A8I8 | |
| RlmE | Protein | uniprot:P0C0R7 | |
| RL1 | Protein | uniprot:P0A7L0 | |
| RL36 | Protein | uniprot:P0A7Q6 | |
| RlmN | Protein | uniprot:P36979 | |
| RL25 | Protein | uniprot:P68919 | |
| RsmA | Protein | uniprot:P06992 | |
| RS12 | Protein | uniprot:P0A7S3 | |
| RL3 | Protein | uniprot:P60438 | |
| RL10 | Protein | uniprot:P0A7J3 | |
| RL14 | Protein | uniprot:P0ADY3 | |
| RS11 | Protein | uniprot:P0A7R9 | |
| Rl21 | Protein | uniprot:P0AG48 | |
| RS9 | Protein | uniprot:P0A7X3 | |
| AmpM | Protein | uniprot:P0AE18 | |
| EftS | Protein | uniprot:P0A6P1 | |
| RsmE | Protein | uniprot:P0AGL7 | |
| RsmG | Protein | uniprot:P0A6U5 | |
| Def | Protein | uniprot:P0A6K3 | |
| RlmA | Protein | uniprot:P36999 | |
| GreB | Protein | uniprot:P30128 | |
| RL11 | Protein | uniprot:P0A7J7 | |
| RS8 | Protein | uniprot:P0A7W7 | |
| RsmD | Protein | uniprot:P0ADX9 | |
| RsmI | Protein | uniprot:P67087 | |
| RlmF | Protein | uniprot:P75782 | |
| TIG | Protein | uniprot:P0A850 | |
| RS13 | Protein | uniprot:P0A7S9 | |
| RS5 | Protein | uniprot:P0A7W1 | |
| RL22 | Protein | uniprot:P61175 | |
| RS7 | Protein | uniprot:P02359 | |
| RL17 | Protein | uniprot:P0AG44 | |
| SelB | Protein | uniprot:P14081 | |
| DeaD | Protein | uniprot:P0A9P6 | |
| RsmC | Protein | uniprot:P39406 | |
| RL15 | Protein | uniprot:P02413 | |
| RsmH | Protein | uniprot:P60390 | |
| RS4 | Protein | uniprot:P0A7V8 | |
| RL28 | Protein | uniprot:P0A7M2 | |
| Rl19 | Protein | uniprot:P0A7K6 | |
| RS3 | Protein | uniprot:P0A7V3 | |
| RS16 | Protein | uniprot:P0A7T3 | |
| RlmM | Protein | uniprot:P0ADR6 | |
| If3 | Protein | uniprot:P0A707 | |
| RsgA | Protein | uniprot:P39286 | |
| Sra | Protein | uniprot:P68191 | |
| RS15 | Protein | uniprot:P0ADZ4 | |
| RL30 | Protein | uniprot:P0AG51 | |
| RL2 | Protein | uniprot:P60422 | |
| Efg | Protein | uniprot:P0A6M8 | |
| RL20 | Protein | uniprot:P0A7L3 | |
| RL29 | Protein | uniprot:P0A7M6 | |
| RL23 | Protein | uniprot:P0ADZ0 | |
| RL9 | Protein | uniprot:P0A7R1 | |
| RS10 | Protein | uniprot:P0A7R5 | |
| RL18 | Protein | uniprot:P0C018 | |
| RL5 | Protein | uniprot:P62399 | |
| RL4 | Protein | uniprot:P60723 | |
| RL35 | Protein | uniprot:P0A7Q1 | |
| RS2 | Protein | uniprot:P0A7V0 | |
| RL27 | Protein | uniprot:P0A7L8 | |
| RL31 | Protein | uniprot:P0A7M9 | |
| RsmB | Protein | uniprot:P36929 | |
| RL13 | Protein | uniprot:P0AA10 | |
| RS20 | Protein | uniprot:P0A7U7 | |
| RS21 | Protein | uniprot:P68679 | |
| RL7 | Protein | uniprot:P0A7K2 | |
| RL6 | Protein | uniprot:P0AG55 | |
| GreA | Protein | uniprot:P0A6W5 | |
| RS18 | Protein | uniprot:P0A7T7 | |
| If2 | Protein | uniprot:P0A705 | |
| If1 | Protein | uniprot:P69222 | |
| RS19 | Protein | uniprot:P0A7U3 | |
| RS1 | Protein | uniprot:P0AG67 | |
| RL32 | Protein | uniprot:P0A7N4 | |
| RL16 | Protein | uniprot:P0ADY7 | |
| RL34 | Protein | uniprot:P0A7P5 | |
| NusA | Protein | uniprot:P0AFF6 | |
| LepA | Protein | uniprot:P60785 | |
| RL24 | Protein | uniprot:P60624 | |
| RS6 | Protein | uniprot:P02358 | |
| RL33 | Protein | uniprot:P0A7N9 | |
| RS14 | Protein | uniprot:P0AG59 | |
| RlmL | Protein | uniprot:P75864 | |
| FtsY | Protein | uniprot:P10121 | |
| Srp54 | Protein | uniprot:P0AGD7 | |
| SecE | Protein | uniprot:P0AG96 | |
| SecG | Protein | uniprot:P0AG99 | |
| SecY | Protein | uniprot:P0AGA2 | |
| SecA | Protein | uniprot:P10408 | |
| SecB | Protein | uniprot:P0AG86 | |
| DamX | Protein | uniprot:P11557 | |
| FtsL | Protein | uniprot:P0AEN4 | |
| FtsI | Protein | uniprot:P0AD68 | |
| FtsQ | Protein | uniprot:P06136 | |
| FtsB | Protein | uniprot:P0A6S5 | |
| FtsW | Protein | uniprot:P0ABG4 | |
| FtsX | Protein | uniprot:P0AC30 | |
| EngB | Protein | uniprot:P0A6P7 | |
| PbpB | Protein | uniprot:P02919 | |
| LpoB | Protein | uniprot:P0AB38 | |
| PspB | Protein | uniprot:P0AFM9 | |
| PspC | Protein | uniprot:P0AFN2 | |
| PspA | Protein | uniprot:P0AFM6 | |
| PspD | Protein | uniprot:P0AFV8 | |
| RpoE | Protein | uniprot:P0AGB6 | |
| RseP | Protein | uniprot:P0AEH1 | |
| YhbJ | Protein | uniprot:P0A894 | |
| RhlB | Protein | uniprot:P0A8J8 | |
| Eno | Protein | uniprot:P0A6P9 | |
| HrpA | Protein | uniprot:P43329 | |
| YcgG | Protein | uniprot:P75995 | |
| SrmB | Protein | uniprot:P21507 | |
| Rnr | Protein | uniprot:P21499 | |
| Hfq | Protein | uniprot:P0A6X3 | |
| Rne | Protein | uniprot:P21513 | |
| Ppk | Protein | uniprot:P0A7B1 | |
| RhlE | Protein | uniprot:P25888 | |
| PncB | Protein | uniprot:P18133 | |
| NuoE | Protein | uniprot:P0AFD1 | |
| NuoG | Protein | uniprot:P33602 | |
| NuoB | Protein | uniprot:P0AFC7 | |
| NuoI | Protein | uniprot:P0AFD6 | |
| NuoCD | Protein | uniprot:P33599 | |
| NuoF | Protein | uniprot:P31979 | |
| NuoH | Protein | uniprot:P0AFD4 | |
| NuoA | Protein | uniprot:P0AFC3 | |
| NuoJ | Protein | uniprot:P0AFE0 | |
| NuoN | Protein | uniprot:P0AFF0 | |
| NuoK | Protein | uniprot:P0AFE4 | |
| NuoM | Protein | uniprot:P0AFE8 | |
| NuoL | Protein | uniprot:P33607 | |
| AtpA | Protein | uniprot:P0ABB0 | |
| AtpB | Protein | uniprot:P0ABB4 | |
| AtpE | Protein | uniprot:P0A6E6 | |
| Atp6 | Protein | uniprot:P68699 | |
| AtpD | Protein | uniprot:P0ABA4 | |
| AtpG | Protein | uniprot:P0ABA6 | |
| AtpL | Protein | uniprot:P68699 | |
| YadG | Protein | uniprot:P36879 | |
| YadH | Protein | uniprot:P0AFN6 | |
| UgpA | Protein | uniprot:P10905 | |
| UgpE | Protein | uniprot:P10906 | |
| LacI | Protein | uniprot:P03023 | |
| UgpB | Protein | uniprot:P0AG80 | |
| MetN | Protein | uniprot:P30750 | |
| MetI | Protein | uniprot:P31547 | |
| MetQ | Protein | uniprot:P28635 | |
| IlvD | Protein | uniprot:P05791 | |
| CysA | Protein | uniprot:P16676 | |
| CysW | Protein | uniprot:P0AEB0 | |
| CysT | Protein | uniprot:P16701 | |
| CysP | Protein | uniprot:P16700 | |
| ZnuC | Protein | uniprot:P39172 | |
| ZnuB | Protein | uniprot:P39832 | |
| ZnuA | Protein | uniprot:P39172 | |
| GlnQ | Protein | uniprot:P10346 | |
| GlnB | Protein | uniprot:P0A9Z1 | |
| GlnH | Protein | uniprot:P0AEQ3 | |
| HisP | Protein | uniprot:P07109 | |
| HisM | Protein | uniprot:P0AEU3 | |
| HisQ | Protein | uniprot:P52094 | |
| HisJ | Protein | uniprot:P0AEU0 | |
| ArtP | Protein | uniprot:P0AAF6 | |
| ArtQ | Protein | uniprot:P0AE34 | |
| ArtM | Protein | uniprot:P0AE30 | |
| ArtJ | Protein | uniprot:P30860 | |
| ArtI | Protein | uniprot:P30859 | |
| CydD | Protein | uniprot:P29018 | |
| CydC | Protein | uniprot:P23886 | |
| PstC | Protein | uniprot:P0AGH8 | |
| PstA | Protein | uniprot:P07654 | |
| PstS | Protein | uniprot:P0AG82 | |
| KefG | Protein | uniprot:P0A756 | |
| KefB | Protein | uniprot:P45522 | |
| SapB | Protein | uniprot:P0AGH3 | |
| SapF | Protein | uniprot:P0AAH8 | |
| SapD | Protein | uniprot:P0AAH4 | |
| SapA | Protein | uniprot:Q47622 | |
| PtgA | Protein | uniprot:P69783 | |
| PtgCB | Protein | uniprot:P69786 | |
| PthP | Protein | uniprot:P0AA04 | |
| Pt1 | Protein | uniprot:P08839 | |
| PttBC | Protein | uniprot:P36672 | |
| PtnAB | Protein | uniprot:P69797 | |
| PtnC | Protein | uniprot:P69801 | |
| PtnD | Protein | uniprot:P69805 | |
| FrdA | Protein | uniprot:P00363 | |
| FrdB | Protein | uniprot:P0AC47 | |
| FrdD | Protein | uniprot:P0A8Q3 | |
| FrdC | Protein | uniprot:P0A8Q0 | |
| DhsB | Protein | uniprot:P07014 | |
| DhsA | Protein | uniprot:P0AC41 | |
| DhsC | Protein | uniprot:P69054 | |
| LldD | Protein | uniprot:P33232 | |
| NdK | Protein | uniprot:P0A763 | |
| SthA | Protein | uniprot:P27306 | |
| CyoD | Protein | uniprot:P0ABJ6 | |
| CyoC | Protein | uniprot:P0ABJ3 | |
| CyoB | Protein | uniprot:P0ABI8 | |
| CyoA | Protein | uniprot:P0ABJ1 | |
| PyrD | Protein | uniprot:P0A7E1 | |
| PgK | Protein | uniprot:P0A799 | |
| YajC | Protein | uniprot:P0ADZ7 | |
| SecD | Protein | uniprot:P0AG90 | |
| SecF | Protein | uniprot:P0AG93 | |
| TatC | Protein | uniprot:P69423 | |
| TatB | Protein | uniprot:P69425 | |
| TatE | Protein | uniprot:P0A843 | |
| TatA | Protein | uniprot:P69428 | |
| LolE | Protein | uniprot:P75958 | |
| LolC | Protein | uniprot:P0ADC3 | |
| LolA | Protein | uniprot:P61316 | |
| LolB | Protein | uniprot:P61320 | |
| LolD | Protein | uniprot:P75957 | |
| GrpE | Protein | uniprot:P09372 | |
| DnaJ | Protein | uniprot:P08622 | |
| DnaK | Protein | uniprot:P0A6Y8 | |
| LonH | Protein | uniprot:P75867 | |
| OpdA | Protein | uniprot:P27298 | |
| AmpA | Protein | uniprot:P68767 | |
| Ch10 | Protein | uniprot:P0A6F9 | |
| Ch60 | Protein | uniprot:P0A6F5 | |
| HslU | Protein | uniprot:P0A6H5 | |
| PpiB | Protein | uniprot:P23869 | |
| HtpG | Protein | uniprot:P0A6Z3 | |
| AccD | Protein | uniprot:P0A9Q5 | |
| BccB | Protein | uniprot:P0ABD8 | |
| AccC | Protein | uniprot:P24182 | |
| Smp | Protein | uniprot:P0AGC7 | |
| GlgA | Protein | uniprot:P0A6U8 | |
| GatY | Protein | uniprot:P0C8J6 | |
| GatZ | Protein | uniprot:P0C8J8 | |
| Odp2 | Protein | uniprot:P06959 | |
| DldH | Protein | uniprot:P0A9P0 | |
| Odp1 | Protein | uniprot:P0AFG8 | |
| Odo2 | Protein | uniprot:P0AFG6 | |
| Odo1 | Protein | uniprot:P0AFG3 | |
| AceE | Protein | uniprot:P0AFG8 | |
| AcoN2 | Protein | uniprot:P36683 | |
| AcoN1 | Protein | uniprot:P25516 | |
| CisY | Protein | uniprot:P0ABH7 | |
| GcdP | Protein | uniprot:P33195 | |
| GcsH | Protein | uniprot:P0A6T9 | |
| GcsT | Protein | uniprot:P27248 | |
| SucC | Protein | uniprot:P0A836 | |
| SucD | Protein | uniprot:P0AGE9 | |
| NifU | Protein | uniprot:P0A6B7 | |
| IscS | Protein | uniprot:P0A6B7 | |
| MetH | Protein | uniprot:P13009 | |
| DppF | Protein | uniprot:P37313 | |
| YdiJ | Protein | uniprot:P31447 | |
| CarA | Protein | uniprot:P0A6F1 | |
| CarB | Protein | uniprot:P00968 | |
| HemY | Protein | uniprot:P0ACB7 | |
| HemG | Protein | uniprot:P0ACB4 | |
| HemH | Protein | uniprot:P23871 | |
| YbbO | Protein | uniprot:P0AFP4 | |
| TreC | Protein | uniprot:P28904 | |
| PdxH | Protein | uniprot:P0AFI7 | |
| NusG | Protein | uniprot:P0AFG0 | |
| RpoB | Protein | uniprot:P0A8V2 | |
| Rho | Protein | uniprot:P0AG30 | |
| RpoA | Protein | uniprot:P0A7Z4 | |
| RpoD | Protein | uniprot:P00579 | |
| RpoC | Protein | uniprot:P0A8T7 | |
| RpoZ | Protein | uniprot:P0A800 | |
| RpoS | Protein | uniprot:P13445 | |
| FadJ | Protein | uniprot:P77399 | |
| FadI | Protein | uniprot:P0AEN1 | |
| FadB | Protein | uniprot:P21177 | |
| FadA | Protein | uniprot:P21151 | |
| FabF | Protein | uniprot:P0AAI5 | |
| FabG | Protein | uniprot:P0AEK2 | |
| FabB | Protein | uniprot:P0A953 | |
| FabR | Protein | uniprot:P0ACU5 | Fatty acid biosynthesis Regulator |
| FabI | Protein | uniprot:P0AEK4 | |
| MlaE | Protein | uniprot:P64606 | |
| MlaD | Protein | uniprot:P64604 | |
| MlaC | Protein | uniprot:P0ADV7 | |
| MlaB | Protein | uniprot:P64602 | |
| MlaF | Protein | uniprot:P63386 | |
| DnaA | Protein | uniprot:P03004 | |
| SeqA | Protein | uniprot:P0AFY8 | |
| MukB | Protein | uniprot:P22523 | |
| MukF | Protein | uniprot:P60293 | |
| MukE | Protein | uniprot:P22524 | |
| ParC | Protein | uniprot:P0AFI2 | |
| ParE | Protein | uniprot:P20083 | |
| Dpo1 | Protein | uniprot:P00582 | |
| Fis | Protein | uniprot:P0A6R3 | |
| DnaB | Protein | uniprot:P0ACB0 | |
| GyrA | Protein | uniprot:P0AES4 | |
| GyrB | Protein | uniprot:P0AES6 | |
| Crp | Protein | uniprot:P0ACJ8 | |
| PutA | Protein | uniprot:P09546 | |
| YfiF | Protein | uniprot:P0AGJ5 | |
| HflD | Protein | uniprot:P25746 | |
| GlgB | Protein | uniprot:P07762 | |
| GlgC | Protein | uniprot:P0A6V1 |
References
- The Escherichia coli peripheral inner membrane proteome. Papanastasiou M, Orfanoudaki G, Koukaki M, Kountourakis N, Sardis MF, Aivaliotis M, et al. Mol Cell Proteomics. 2013 Mar;12(3):599–610. PubMed Europe PMC Scholia