Cardiolipin biosynthesis (WP2208)

Oryza sativa

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Cardiolipin is one of the important phospholipid present in the inner membrane of mitochondria and plays an important role in ATP synthesis mediated by oxidative phosphorylation. Pathway is mirrored from the RiceCyc pathway database provided by the Gramene project (www.gramene.org). gene assignments are based on the sequence homology.

Authors

Pankaj Jaiswal , Christine Chichester , Egon Willighagen , Eric Weitz , and Lars Willighagen

Activity

last edited

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Organisms

Oryza sativa

Communities

Annotations

Pathway Ontology

cardiolipin biosynthetic pathway

Participants

Label Type Compact URI Comment
CTP Metabolite cas:65-47-4
H2O Metabolite cas:7732-18-5
CDP-diacylglycerol Metabolite chebi:17962
sn-glycerol-3-phosphate Metabolite cas:57-03-4
1,2-diacylglycerol-3-phosphate Metabolite kegg.compound:C00416
L-1-phosphatidyl-glycerol Metabolite chebi:17517
Cardiolipin Metabolite chebi:28494
Phosphate Metabolite cas:14265-44-2
Diphosphate Metabolite cas:2466-09-3
CMP Metabolite cas:63-37-6
L-1-phosphatidylglycerol-phosphate Metabolite chebi:37393
LOC_OS04G57500 GeneProduct :LOC_OS04G57500.1 phosphatidate cytidylyltransferase, putative, expressed//phosphatidate cytidylyltransferase
EC:2.7.7.41 GeneProduct eccode:2.7.7.41
EC:3.1.3.27 GeneProduct eccode:3.1.3.27
LOC_Os02g05400 GeneProduct :LOC_Os02g05400 transmembrane protein 15, putative, expressed//phosphatidate cytidylyltransferase
LOC_Os04g57500 GeneProduct :LOC_Os04g57500 phosphatidate cytidylyltransferase, putative, expressed//phosphatidate cytidylyltransferase
LOC_Os01g57930 GeneProduct :LOC_Os01g57930 CDP-alcohol phosphatidyltransferase, putative, expressed//CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
LOC_Os01g58390 GeneProduct :LOC_Os01g58390 This is homologous to Yeast gene entry YHR100C from Uniprot P38812 (GEP4_YEAST). The sequence identity is about 33%, but was the best hit and has HAD-SF_ppase_IIIA domain. Arabidopsis homolog is AT3G58830.
LOC_Os03g17520 GeneProduct :LOC_Os03g17520 CDP-alcohol phosphatidyltransferase, putative, expressed//CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase//CDP-diacylglycerol-serine O-phosphatidyltransferase
cardiolinin synthase GeneProduct eccode:2.7.8.- Cardiolipin synthase. Arabidopsis homolog is AT4G04870 (CLS)
EC:2.7.8.5 GeneProduct eccode:2.7.8.5
LOC_Os01g57930 GeneProduct :LOC_Os01g58390 Homolog of AT4G04870 (CLS).

References

  1. Component Fatty Acids of Acidic Glycerophospholipids in Rice Grains: Universal Order of Unsaturation Index in Each Lipid among Varieties. CHOI SK, TAKAHASHI E, INATSU O, MANO Y, OHNISHI M. J Oleo Sci [Internet]. 2005;54(7):369–73. Available from: http://dx.doi.org/10.5650/jos.54.369 DOI Scholia
  2. Biosynthesis of Cardiolipin in Plant Mitochondria. Frentzen M, Griebau R. Plant Physiol. 1994 Dec;106(4):1527–32. PubMed Europe PMC Scholia