wikipathways-collection

WikiPathways WP4538

• WikiPathways: WP4538 (classic)
• Species: Homo sapiens
• Scholia: WP4538

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 3
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 118
• Number of assertions: 237
• Number of fails: 1

Fails

Interactions with Labels

Interactions found that involve Labels: 3

• http://classic.wikipathways.org/instance/WP4538_r129731 “placeholder

miR-19a” with graphId e3b75

• http://classic.wikipathways.org/instance/WP4538_r129731 “placeholder

miR-7a” with graphId f1625

• http://classic.wikipathways.org/instance/WP4538_r129731 “placeholder

miR-135a-5p miR-17-5p miR-29b miR-124 miR-519a” with graphId b8108

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels