wikipathways-collection

WikiPathways WP3680

• WikiPathways: WP3680 (classic)
• Species: Homo sapiens
• Scholia: WP3680

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 8
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 1
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 2

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 8

http://classic.wikipathways.org/instance/WP3680_r123395 "Actin 
polymerisation" with graphId eb251
http://classic.wikipathways.org/instance/WP3680_r123395 "Receptor ubiquiltylation" with graphId d5514
http://classic.wikipathways.org/instance/WP3680_r123395 "Disturbance of mitochondrial respiration" with graphId ade4b
http://classic.wikipathways.org/instance/WP3680_r123395 "Cellular targets" with graphId e9723
http://classic.wikipathways.org/instance/WP3680_r123395 "DNA" with graphId d0147
http://classic.wikipathways.org/instance/WP3680_r123395 "Cell cycle" with graphId d5964
http://classic.wikipathways.org/instance/WP3680_r123395 "Degradation" with graphId dc280
http://classic.wikipathways.org/instance/WP3680_r123395 "Adhesion migration" with graphId bb94f

Possible MIM translocation

Interactions between identical nodes: 1

http://classic.wikipathways.org/instance/WP3680_r123395 http://rdf.wikipathways.org/Pathway/WP3680_r123395/WP/Interaction/idf50f8b "NO" (https://identifiers.org/chebi/CHEBI:16480) and 
NO" (https://identifiers.org/chebi/CHEBI:16480)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations