wikipathways-collection

WikiPathways WP3262

• WikiPathways: WP3262 (classic)
• Species: Bos taurus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 48
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 48

• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c1a (1.2.1.18)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/f00 (1.4.3.1)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cfc (1.4.3.15)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d6e (1.4.3.16)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/ae1 (1.4.3.2)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fee4c (2-Oxosuccinamate)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fa3 (2.1.3.2)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cc7 (2.3.1.7)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/b8d (2.6.1.12)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/daf (2.6.1.14)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d7d (2.6.1.18)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/a77 (3.4.13.3)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d0b (3.5.1.1)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/a3a (3.5.1.3)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cba (3.5.1.38)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c70 (3.5.1.7)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/adf (4.1.1.11)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/afd (4.1.1.12)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cc2 (4.3.1.1)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fa7 (4.3.2.2)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/b27 (5.1.1.1)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c41 (5.1.1.13)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d73 (6.1.1.22)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/e4d (6.1.1.7)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c02 (6.3.1.1)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d4b (6.3.2.11)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/f29 (6.3.4.4)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fd0 (6.3.5.4)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/ca3 (6.3.5.6)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d9688 (Adenylosuccinate)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/df01d (Arginine and Proline metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d1d97 (Cyanoamino acid metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cff02 (D-Ala metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/bd17e (Glycine, serine and threonine metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/dec22 (Histidine metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/ac9a7 (Lysine biosynthesis)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c83b6 (N-Acetyl-L-aspartate)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/e7f96 (Nicotinate and nicotinamide metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/f1101 (Nicotinate and nicotinamide metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/e6cd3 (Pantothenate and CoA biosynthesis)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/c8f0c (Pyrimidine metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fd73c (Reductive carboxylate cycle (CO2 fixation))
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/fa5a8 (Reductive carboxylate cycle (CO2 fixation))
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/e7816 (Selenoamino acid metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d5802 (beta-Alanine metabolism)
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/cee19 (tRNA (Asn))
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/e0b6b (tRNA (Asn))
• http://classic.wikipathways.org/instance/WP3262_r123267 http://rdf.wikipathways.org/Pathway/WP3262_r123267/DataNode/d25c6 (tRNA(Asp))

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier