WikiPathways WP4917
- WikiPathways: WP4917 (classic)
- Species: Homo sapiens
- Scholia: WP4917
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- CovidDiseaseMapsTests
- interactionsWithoutReferences: .x we found 1 problem(s):
- missingHGNC: .. all OK!
- DataNodesTests: all 5 tests OK!
- EnsemblTests: all 5 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 15 tests OK!
- HMDBMetabolitesTests: all 2 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- IEMPathwayTests
- allMetabolitesInteract: .x we found 1 problem(s):
- metabolicConversions: .. all OK!
- catalystsWithCommonDataSource: .. all OK!
- metabolicConversionIdentifiersCommon: .. all OK!
- diseasesHaveIdentifiers: .. all OK!
- omimIdentifiers: .. all OK!
- InteractionTests
- noMetaboliteToNonMetaboliteConversions: .. all OK!
- noNonMetaboliteToMetaboliteConversions: .. all OK!
- noGeneProteinConversions: .. all OK!
- nonNumericIDs: .. all OK!
- interactionsWithLabels: .. all OK!
- possibleTranslocations: .x we found 1 problem(s):
- noProteinProteinConversions: .. all OK!
- incorrectKEGGIdentifiers: .. all OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 15 tests OK!
- OudatedDataSourcesTests: all 24 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests
- keggWithoutMapping: .. all OK!
- pubchemCIDWithoutMapping: .. all OK!
- hmdbWithoutMapping: .. all OK!
- casWithoutMapping: .. all OK!
- wikDataTypo: .. all OK!
- duplicateWikidataMappings: .. all OK!
- wikidataIdentifiersWrong: .. all OK!
- chemspiderCIDWithoutMapping: .. all OK!
- lipidMapsWithoutMapping: .. all OK!
- kNApSAcKWithoutMapping: .. all OK!
- replaceWikipedia: .. all OK!
- chebiWithoutMapping_Reactome: .. all OK!
- chebiWithoutMapping: .x we found 1 problem(s):
- inchikeyWithoutMapping: .. all OK!
- retiredIdentifiers: .. all OK!
Summary
- Number of test classes: 23
- Number of tests: 140
- Number of assertions: 281
- Number of fails: 4
Fails
Interactions without references
Interactions without literature references: 92
More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences
Found metabolites without interaction: 2
More details at https://www.wikipathways.org/WikiPathwaysCurator/IEMPathwayTests/allMetabolitesInteract
Possible MIM translocation
Interactions between identical nodes: 87
More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations
ChEBI identifier without a match in Wikidata
ChEBI identifiers without Wikidata mappings: 3
More details at https://www.wikipathways.org/WikiPathwaysCurator/WikidataTests/chebiWithoutMapping