SARS-CoV-2-WikiPathways

WikiPathways WP4846

• WikiPathways: WP4846 (classic)
• Species: Homo sapiens
• Scholia: WP4846
• WPRDF file: wp/Human/WP4846.ttl
• GPMLRDF file: wp/gpml/Human/WP4846.ttl
• SBML file: sbml/WP4846.sbml (SVG) (conversion notes)

Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• CovidDiseaseMapsTests
  • interactionsWithoutReferences: .x we found 1 problem(s):
    • Interactions without literature references: 50
  • missingHGNC: .. all OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBMetabolitesTests: all 1 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 7 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 13 tests OK!

Summary

• Number of test classes: 22
• Number of tests: 111
• Number of assertions: 224
• Number of fails: 1

Fails

Interactions without references

Interactions without literature references: 50

• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idaf9c6f8
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id7a78fc75
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id95aba954
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idaf62af2b
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/aceb2
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idc79adab4
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/df765
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/dca52
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idd6e4d05b
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/d78c0
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/f262e
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id5ff07442
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/f9791
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id31b492b0
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/cf207
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/f8ee8
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/cd41e
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/f1172
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id97734b0e
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/cec01
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id1f86b6c5
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id68553d54
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/f81a2
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idc3f0c926
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id4f170add
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/ae185
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/dd252
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idba2d7d98
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/aec54
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/b6f1b
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/ida427ca0
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id3d108ea2
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id126968be
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/c3f71
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/c9b9f
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id254c7db4
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/idb8ba3d51
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/f30e4
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id9d2699b4
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/d8831
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/ec0be
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id88a323b4
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id53ccbca1
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id5c4ff7f0
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/id66bc3866
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/c849c
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/ida46f2e34
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/e6bd7
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/WP/Interaction/efcb8
• http://classic.wikipathways.org/instance/WP4846_r124663 -> http://rdf.wikipathways.org/Pathway/WP4846_r124663/ComplexBinding/c25c7

More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences

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