wikipathways-collection

WikiPathways WP5534

• WikiPathways: WP5534 (classic)
• Species: Homo sapiens
• Scholia: WP5534

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 2
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .x we found 1 problem(s):
    • The following DataNodes have Unknown @Type: 1
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests
  • deletedPathways: .. all OK!
  • linksToDeletedPathways: .. all OK!
  • linksToDeletedPathways_All: .. all OK!
  • speciesMismatch: .. all OK!
  • testRoundedRectangle: .. all OK!
  • youMustCite: .. all OK!
  • oldLicenses: .. all OK!
  • mediawikiLinks: .x we found 1 problem(s):
    • Pathways of which the description may contain MediaWiki-style links: 1
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 120
• Number of assertions: 241
• Number of fails: 3

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 2

• http://classic.wikipathways.org/instance/WP5534_r138466 http://rdf.wikipathways.org/Pathway/WP5534_r138466/DataNode/f89da (Light)
• http://classic.wikipathways.org/instance/WP5534_r138466 http://rdf.wikipathways.org/Pathway/WP5534_r138466/DataNode/deaa5 (Visual phototransduction pathway)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

Datanodes of unknown type

The following DataNodes have Unknown @Type: 1

• http://classic.wikipathways.org/instance/WP5534_r138466 http://rdf.wikipathways.org/Pathway/WP5534_r138466/DataNode/f89da (Light)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/unknownTypes

PathwayTests.mediawikiLinks

Pathways of which the description may contain MediaWiki-style links: 1

[["homepage"],
["http://classic.wikipathways.org/instance/WP5534_r138466"]
]