wikipathways-collection

WikiPathways WP5314

• WikiPathways: WP5314 (classic)
• Species: Homo sapiens
• Scholia: WP5314

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .. all OK!
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 14
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

Possible MIM translocation

Interactions between identical nodes: 14

http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/idcb738b48 "Na+" (https://identifiers.org/chebi/CHEBI:29101) and 
Na+" (https://identifiers.org/chebi/CHEBI:29101)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/idc7ef6d7b "HCO3-" (https://identifiers.org/chebi/CHEBI:17544) and 
HCO3-" (https://identifiers.org/chebi/CHEBI:17544)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/ide8e3e04f "glutamine" (https://identifiers.org/chebi/CHEBI:28300) and 
glutamine" (https://identifiers.org/chebi/CHEBI:28300)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id24d75b25 "HCO3-" (https://identifiers.org/chebi/CHEBI:17544) and 
HCO3-" (https://identifiers.org/chebi/CHEBI:17544)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/idfbad38df "glutamate" (https://identifiers.org/chebi/CHEBI:14321) and 
glutamate" (https://identifiers.org/chebi/CHEBI:14321)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id1f5335c9 "H+" (https://identifiers.org/chebi/CHEBI:15378) and 
H+" (https://identifiers.org/chebi/CHEBI:15378)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id8e38f6e7 "CO2" (https://identifiers.org/chebi/CHEBI:16526) and 
CO2" (https://identifiers.org/chebi/CHEBI:16526)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/a2827 "K+" (https://identifiers.org/chebi/CHEBI:29103) and 
K+" (https://identifiers.org/chebi/CHEBI:29103)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/ida4c7d417 "lactate" (https://identifiers.org/chebi/CHEBI:24996) and 
lactate" (https://identifiers.org/chebi/CHEBI:24996)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id4c1ca33 "glucose" (https://identifiers.org/chebi/CHEBI:17234) and 
glucose" (https://identifiers.org/chebi/CHEBI:17234)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id53b50a6e "glucose" (https://identifiers.org/chebi/CHEBI:17234) and 
glucose" (https://identifiers.org/chebi/CHEBI:17234)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id5affd5c7 "Na+" (https://identifiers.org/chebi/CHEBI:29101) and 
Na+" (https://identifiers.org/chebi/CHEBI:29101)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id5ca97d16 "glutamate" (https://identifiers.org/chebi/CHEBI:14321) and 
glutamate" (https://identifiers.org/chebi/CHEBI:14321)
http://classic.wikipathways.org/instance/WP5314_r134484 http://rdf.wikipathways.org/Pathway/WP5314_r134484/WP/Interaction/id39db684d "CO2" (https://identifiers.org/chebi/CHEBI:16526) and 
CO2" (https://identifiers.org/chebi/CHEBI:16526)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations