wikipathways-collection

WikiPathways WP5300

• WikiPathways: WP5300 (classic)
• Species: Homo sapiens
• Scholia: WP5300

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 39
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 118
• Number of assertions: 237
• Number of fails: 1

Fails

Interactions with Labels

Interactions found that involve Labels: 39

• http://classic.wikipathways.org/instance/WP5300_r134245 “Cell cycle regulation “ with graphId cecba
• http://classic.wikipathways.org/instance/WP5300_r134245 “Enhances GC cell tolerance to chemotherapy” with graphId d48b2
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP cells “ with graphId de752
• http://classic.wikipathways.org/instance/WP5300_r134245 “In MTE-4-14 cells” with graphId bfaf9
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP cells and xenografts, PC-3, and VCaP cells “ with graphId c9c60
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP, PC-3, VCaP, DU-145 cells “ with graphId aeaa5
• http://classic.wikipathways.org/instance/WP5300_r134245 “Upregulated in Panc02, Hela,C33A TRAMP C2 & HEP2 cells and down-regulated in MTE-4-14 cells” with graphId d26fa
• http://classic.wikipathways.org/instance/WP5300_r134245 “In PC3-2 cells” with graphId b7cbf
• http://classic.wikipathways.org/instance/WP5300_r134245 “In A549 NSCLCs” with graphId b224a
• http://classic.wikipathways.org/instance/WP5300_r134245 “In BGC-823 and HGC27 cells “ with graphId e3fb8
• http://classic.wikipathways.org/instance/WP5300_r134245 “In A2780, Hela and C33A cells” with graphId fffc7
• http://classic.wikipathways.org/instance/WP5300_r134245 “In Hela and C33A cells” with graphId a992a
• http://classic.wikipathways.org/instance/WP5300_r134245 “In HUVECs” with graphId b4b63
• http://classic.wikipathways.org/instance/WP5300_r134245 “NU” with graphId bd9a7
• http://classic.wikipathways.org/instance/WP5300_r134245 “CY” with graphId f6729
• http://classic.wikipathways.org/instance/WP5300_r134245 “Induces EMT in MGC803 cells” with graphId daff4
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP cells and xenografts leading to DNA condensation and decrease in histone methylation” with graphId c76ac
• http://classic.wikipathways.org/instance/WP5300_r134245 “In v-SRC PEC cells “ with graphId f49ef
• http://classic.wikipathways.org/instance/WP5300_r134245 “In TROP2- overexpressing H1299,CL1-0 and H23 lung cancer cells” with graphId f637f
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP and PC-3 cells “ with graphId fa71a
• http://classic.wikipathways.org/instance/WP5300_r134245 “In GBC-SD and SGC-996 cells” with graphId b0cc2
• http://classic.wikipathways.org/instance/WP5300_r134245 “In A549 NSCLCs” with graphId c4987
• http://classic.wikipathways.org/instance/WP5300_r134245 “In HCT116 cells” with graphId e7c99
• http://classic.wikipathways.org/instance/WP5300_r134245 “In H1299 and H23 cells” with graphId db60b
• http://classic.wikipathways.org/instance/WP5300_r134245 “In TROP2- overexpressing H1299,CL1-0 and H23 lung cancer cells” with graphId a6316
• http://classic.wikipathways.org/instance/WP5300_r134245 “In 8505C, K1 and FT-133 cells” with graphId f1e9d
• http://classic.wikipathways.org/instance/WP5300_r134245 “Proliferation and migration of HN6, SCC4,MG63, KM12SM MNNG/HOS, U2OS,MTE4-14 and PC-9/GR cells” with graphId ae0a9
• http://classic.wikipathways.org/instance/WP5300_r134245 “CY” with graphId e9a6b
• http://classic.wikipathways.org/instance/WP5300_r134245 “NU” with graphId f47ac
• http://classic.wikipathways.org/instance/WP5300_r134245 “In HeLa cells” with graphId e9f82
• http://classic.wikipathways.org/instance/WP5300_r134245 “In MTE-4-14 cells” with graphId b43e2
• http://classic.wikipathways.org/instance/WP5300_r134245 “Enhanced directional migration” with graphId cef9f
• http://classic.wikipathways.org/instance/WP5300_r134245 “In FT-133, FADU and MTE-4-14 cells” with graphId c96b3
• http://classic.wikipathways.org/instance/WP5300_r134245 “CE” with graphId e00d1
• http://classic.wikipathways.org/instance/WP5300_r134245 “FA” with graphId aa378
• http://classic.wikipathways.org/instance/WP5300_r134245 “In Panc02, Hela and C33A cells” with graphId dcb8a
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LNCaP & TRAMP C2 cells” with graphId a9d99
• http://classic.wikipathways.org/instance/WP5300_r134245 “In LN-229 and U87-MG cells” with graphId f16cd
• http://classic.wikipathways.org/instance/WP5300_r134245 “Upregulated in VCaP cells & downregulated in LNCaP cells & 22Rv1 cells “ with graphId efd5a

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels