wikipathways-collection

WikiPathways WP5300

• WikiPathways: WP5300 (classic)
• Species: Homo sapiens
• Scholia: WP5300

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 39
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 39

http://classic.wikipathways.org/instance/WP5300_r134245 "Cell cycle
regulation
" with graphId cecba
http://classic.wikipathways.org/instance/WP5300_r134245 "Enhances
GC cell 
tolerance to
chemotherapy" with graphId d48b2
http://classic.wikipathways.org/instance/WP5300_r134245 "In LNCaP
cells 
" with graphId de752
http://classic.wikipathways.org/instance/WP5300_r134245 "In MTE-4-14 cells" with graphId bfaf9
http://classic.wikipathways.org/instance/WP5300_r134245 "In LNCaP cells 
and xenografts,
PC-3, and
VCaP cells
" with graphId c9c60
http://classic.wikipathways.org/instance/WP5300_r134245 "In
LNCaP,
PC-3,
VCaP,
DU-145
cells
" with graphId aeaa5
http://classic.wikipathways.org/instance/WP5300_r134245 "Upregulated
in Panc02, 
Hela,C33A
TRAMP C2 &
HEP2 cells and
down-regulated
in MTE-4-14 cells" with graphId d26fa
http://classic.wikipathways.org/instance/WP5300_r134245 "In
PC3-2
cells" with graphId b7cbf
http://classic.wikipathways.org/instance/WP5300_r134245 "In A549
NSCLCs" with graphId b224a
http://classic.wikipathways.org/instance/WP5300_r134245 "In BGC-823 and
HGC27 cells " with graphId e3fb8
http://classic.wikipathways.org/instance/WP5300_r134245 "In
A2780,
Hela and C33A
cells" with graphId fffc7
http://classic.wikipathways.org/instance/WP5300_r134245 "In
Hela
and
C33A
cells" with graphId a992a
http://classic.wikipathways.org/instance/WP5300_r134245 "In
HUVECs" with graphId b4b63
http://classic.wikipathways.org/instance/WP5300_r134245 "CY" with graphId f6729
http://classic.wikipathways.org/instance/WP5300_r134245 "NU" with graphId bd9a7
http://classic.wikipathways.org/instance/WP5300_r134245 "Induces EMT
in MGC803
cells" with graphId daff4
http://classic.wikipathways.org/instance/WP5300_r134245 "In LNCaP cells 
and xenografts
leading to
DNA condensation
and decrease in
histone methylation" with graphId c76ac
http://classic.wikipathways.org/instance/WP5300_r134245 "In 
v-SRC PEC
cells 
" with graphId f49ef
http://classic.wikipathways.org/instance/WP5300_r134245 "In TROP2-
overexpressing
H1299,CL1-0
and H23 lung
cancer cells" with graphId f637f
http://classic.wikipathways.org/instance/WP5300_r134245 "In
LNCaP
and
PC-3
cells " with graphId fa71a
http://classic.wikipathways.org/instance/WP5300_r134245 "In GBC-SD and
SGC-996 cells" with graphId b0cc2
http://classic.wikipathways.org/instance/WP5300_r134245 "In A549
NSCLCs" with graphId c4987
http://classic.wikipathways.org/instance/WP5300_r134245 "In
HCT116
cells" with graphId e7c99
http://classic.wikipathways.org/instance/WP5300_r134245 "In
H1299 and
H23 cells" with graphId db60b
http://classic.wikipathways.org/instance/WP5300_r134245 "In TROP2-
overexpressing
H1299,CL1-0
and H23 lung
cancer cells" with graphId a6316
http://classic.wikipathways.org/instance/WP5300_r134245 "In 8505C,
K1 and
FT-133 
cells" with graphId f1e9d
http://classic.wikipathways.org/instance/WP5300_r134245 "Proliferation and migration
of HN6, SCC4,MG63, KM12SM
MNNG/HOS, U2OS,MTE4-14 and
PC-9/GR cells" with graphId ae0a9
http://classic.wikipathways.org/instance/WP5300_r134245 "CY" with graphId e9a6b
http://classic.wikipathways.org/instance/WP5300_r134245 "NU" with graphId f47ac
http://classic.wikipathways.org/instance/WP5300_r134245 "In
HeLa
cells" with graphId e9f82
http://classic.wikipathways.org/instance/WP5300_r134245 "In
MTE-4-14 
cells" with graphId b43e2
http://classic.wikipathways.org/instance/WP5300_r134245 "Enhanced
directional
migration" with graphId cef9f
http://classic.wikipathways.org/instance/WP5300_r134245 "In FT-133,
FADU and
MTE-4-14 
cells" with graphId c96b3
http://classic.wikipathways.org/instance/WP5300_r134245 "CE" with graphId e00d1
http://classic.wikipathways.org/instance/WP5300_r134245 "FA" with graphId aa378
http://classic.wikipathways.org/instance/WP5300_r134245 "In
Panc02, 
Hela and 
C33A
cells" with graphId dcb8a
http://classic.wikipathways.org/instance/WP5300_r134245 "In LNCaP &
TRAMP C2 
cells" with graphId a9d99
http://classic.wikipathways.org/instance/WP5300_r134245 "In 
LN-229
and 
U87-MG
cells" with graphId f16cd
http://classic.wikipathways.org/instance/WP5300_r134245 "Upregulated
in VCaP cells &
downregulated
in LNCaP cells
& 22Rv1 cells " with graphId efd5a