wikipathways-collection

WikiPathways WP525

• WikiPathways: WP525 (classic)
• Species: Caenorhabditis elegans

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .. all OK!
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 9
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

Possible MIM translocation

Interactions between identical nodes: 9

http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id5d87cbcd "UBL-5" (https://identifiers.org/ensembl/WBGene00006726) and 
UBL-5" (https://identifiers.org/ensembl/WBGene00006726)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id9fa977d2 "eIF2-alpha(Y37E3.10)" (https://identifiers.org/ensembl/WBGene00021351) and 
eIF2-alpha(Y37E3.10)" (https://identifiers.org/ensembl/WBGene00021351)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id468d5052 "eIF2-alpha(Y37E3.10)" (https://identifiers.org/ensembl/WBGene00021351) and 
eIF2-alpha(Y37E3.10)" (https://identifiers.org/ensembl/WBGene00021351)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id7dc4acf4 "ATFS-1  Fragments" (https://identifiers.org/chebi/CHEBI:16670) and 
ATFS-1  Fragments" (https://identifiers.org/chebi/CHEBI:16670)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id7dc4acf4 "ATFS-1  Fragments" (https://identifiers.org/chebi/CHEBI:16670) and 
Protein Fragments" (https://identifiers.org/chebi/CHEBI:16670)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id7dc4acf4 "Protein Fragments" (https://identifiers.org/chebi/CHEBI:16670) and 
ATFS-1  Fragments" (https://identifiers.org/chebi/CHEBI:16670)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id7dc4acf4 "Protein Fragments" (https://identifiers.org/chebi/CHEBI:16670) and 
Protein Fragments" (https://identifiers.org/chebi/CHEBI:16670)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/ida90cc3b4 "ATFS-1" (https://identifiers.org/ensembl/WBGene00013878) and 
ATFS-1" (https://identifiers.org/ensembl/WBGene00013878)
http://classic.wikipathways.org/instance/WP525_r135406 http://rdf.wikipathways.org/Pathway/WP525_r135406/WP/Interaction/id756140b4 "ATFS-1" (https://identifiers.org/ensembl/WBGene00013878) and 
ATFS-1" (https://identifiers.org/ensembl/WBGene00013878)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations