wikipathways-collection

WikiPathways WP5182

• WikiPathways: WP5182 (classic)
• Species: Homo sapiens
• Scholia: WP5182

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 2
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .x we found 1 problem(s):
    • Unexpected protein-protein conversions: 1
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 2

Fails

Interactions with Labels

Interactions found that involve Labels: 2

• http://classic.wikipathways.org/instance/WP5182_r122168 “Apoptososome” with graphId ad5d3
• http://classic.wikipathways.org/instance/WP5182_r122168 “Uncompensated oxidative stress” with graphId ea839

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels

Protein converted into another protein

Unexpected protein-protein conversions: 1

• Homo sapiens http://classic.wikipathways.org/instance/WP5182_r122168 -> https://identifiers.org/uniprot/Q12933 https://identifiers.org/uniprot/Q9Y572 http://rdf.wikipathways.org/Pathway/WP5182_r122168/WP/Interaction/id9001e123

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/noProteinProteinConversions