wikipathways-collection

WikiPathways WP473

• WikiPathways: WP473 (classic)
• Species: Rattus norvegicus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests
  • entrezGeneIdentifiersNotNumber: .. all OK!
  • affyProbeIdentifiersNotCorrect: .. all OK!
  • outdatedIdentifiers: …. all OK!
  • nonNumericHGNCAccessionNumbers: .. all OK!
  • genesWithoutEnsemblMapping: .x we found 1 problem(s):
    • The following genes with an identifier have been found but that do not have a mapping to Ensembl: 45
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 118
• Number of assertions: 237
• Number of fails: 1

Fails

Genes with identifier but no Ensembl identifier mapping

The following genes with an identifier have been found but that do not have a mapping to Ensembl: 45

http://classic.wikipathways.org/instance/WP473_r125508 Gpr31 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr35 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr1086 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr420 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 NTSR2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Adrb2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr52 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Cxcr7 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Adora3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Tbxa2r with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 MC1R with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr1087 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr87 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Ccr8 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Ccr4 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Ccrl2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Avpr1a with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Drd2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Htr1b with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 P2ry4 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr1201 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Ccr1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Bdkrb1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Il8rb with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Mchr1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Cxcr3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Ltb4r with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr1075 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Avpr1b with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Opn1mw with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 OPN1MW with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Bdkrb2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Hcrtr2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Galr3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Olr1329 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr83 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Htr2b with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Mtnr1b with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr45 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Trhr with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Sstr3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Nmur1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Cxcr5 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP473_r125508 Gpr68 with datasource Entrez Gene

More details at https://www.wikipathways.org/WikiPathwaysCurator/GeneTests/genesWithoutEnsemblMapping