wikipathways-collection

WikiPathways WP4482

• WikiPathways: WP4482 (classic)
• Species: Homo sapiens
• Scholia: WP4482

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 6
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 6

http://classic.wikipathways.org/instance/WP4482_r135056 "T-cell receptor
activation" with graphId d16a2
http://classic.wikipathways.org/instance/WP4482_r135056 "IL6 and TNF expression
inflammation, apoptosis, 
cell growth, 
cell differentiation" with graphId f2de7
http://classic.wikipathways.org/instance/WP4482_r135056 "TGFB receptor
activation" with graphId ffe59
http://classic.wikipathways.org/instance/WP4482_r135056 "Cell stress (UV-light, heat),
proinflammatory cytokines
growth factors" with graphId bde14
http://classic.wikipathways.org/instance/WP4482_r135056 "DNA" with graphId cec96
http://classic.wikipathways.org/instance/WP4482_r135056 "Proinflammatory cytokines,
oxidative stress,
UV light,
Bacterial products e.g. LPS" with graphId e0584