wikipathways-collection

WikiPathways WP41

• WikiPathways: WP41 (classic)
• Species: Mus musculus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests
  • entrezGeneIdentifiersNotNumber: .. all OK!
  • affyProbeIdentifiersNotCorrect: .. all OK!
  • outdatedIdentifiers: …. all OK!
  • nonNumericHGNCAccessionNumbers: .. all OK!
  • genesWithoutEnsemblMapping: .x we found 1 problem(s):
    • The following genes with an identifier have been found but that do not have a mapping to Ensembl: 57
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 118
• Number of assertions: 237
• Number of fails: 1

Fails

Genes with identifier but no Ensembl identifier mapping

The following genes with an identifier have been found but that do not have a mapping to Ensembl: 57

http://classic.wikipathways.org/instance/WP41_r128009 Q9JM27 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr7 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM40 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9EPY6 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM33 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM26 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM24 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERY2 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9EPV2 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Gprc2a-rs2 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM37 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr53 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9ESF9 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERW4 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM41 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM34 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Htr1da with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM31 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr55 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM25 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Gprc2a-rs3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JHH0 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Gprc2a-rs1 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM42 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9EPY8 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM36 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Gpr7 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM28 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr28 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Olfr20 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM21 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM23 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM39 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM17 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr4 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 V1rc4 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9WU87_MOUSE with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Olfr1355 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Htr1db with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERY0 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ESG1_MOUSE with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JHK3 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERX0 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q61071 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERX6 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM29 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERX4 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM30 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Q9ERY7 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 V2r3 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM18 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 V1rb6 with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM19 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 V1rc9 with datasource MGI
http://classic.wikipathways.org/instance/WP41_r128009 Q9JM22 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP41_r128009 Opn1lw with datasource Entrez Gene
http://classic.wikipathways.org/instance/WP41_r128009 Olfr22-ps1 with datasource Entrez Gene

More details at https://www.wikipathways.org/WikiPathwaysCurator/GeneTests/genesWithoutEnsemblMapping