wikipathways-collection

WikiPathways WP2882

Summary

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 5

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

Datanodes of unknown type

The following DataNodes have Unknown @Type: 4

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/unknownTypes

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 9

http://classic.wikipathways.org/instance/WP2882_r126680 "VDR ligand" with graphId fec41
http://classic.wikipathways.org/instance/WP2882_r126680 "ER ligand" with graphId b8e64
http://classic.wikipathways.org/instance/WP2882_r126680 "CAR/PXR Ligand" with graphId e0f7e
http://classic.wikipathways.org/instance/WP2882_r126680 "FXR ligand" with graphId e017f
http://classic.wikipathways.org/instance/WP2882_r126680 "NRF2 ligand" with graphId b82e2
http://classic.wikipathways.org/instance/WP2882_r126680 "LXR ligand" with graphId ed878
http://classic.wikipathways.org/instance/WP2882_r126680 "GR ligand" with graphId ad7a3
http://classic.wikipathways.org/instance/WP2882_r126680 "AhR Ligand" with graphId bb415
http://classic.wikipathways.org/instance/WP2882_r126680 "FXR Target genes" with graphId c1651

Possible MIM translocation

Interactions between identical nodes: 14

http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/idc3e30c77 "RXRA" (https://identifiers.org/ensembl/ENSG00000186350) and 
RXRA" (https://identifiers.org/ensembl/ENSG00000186350)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/id845d8be8 "NR1I3" (https://identifiers.org/ensembl/ENSG00000143257) and 
NR1I3" (https://identifiers.org/ensembl/ENSG00000143257)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/ida9df0723 "NR1I2" (https://identifiers.org/ensembl/ENSG00000144852) and 
NR1I2" (https://identifiers.org/ensembl/ENSG00000144852)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/ide426961c "NFE2L2" (https://identifiers.org/ensembl/ENSG00000116044) and 
NFE2L2" (https://identifiers.org/ensembl/ENSG00000116044)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/fa0d4 "PPARA" (https://identifiers.org/ensembl/ENSG00000186951) and 
PPARA" (https://identifiers.org/ensembl/ENSG00000186951)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/ecd1c "NFE2L2" (https://identifiers.org/ensembl/ENSG00000116044) and 
NFE2L2" (https://identifiers.org/ensembl/ENSG00000116044)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/idf13776e "RXRA" (https://identifiers.org/ensembl/ENSG00000186350) and 
RXRA" (https://identifiers.org/ensembl/ENSG00000186350)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/id996b1555 "NR1H3" (https://identifiers.org/ensembl/ENSG00000025434) and 
NR1H3" (https://identifiers.org/ensembl/ENSG00000025434)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/ef334 "SRC" (https://identifiers.org/ensembl/ENSG00000197122) and 
SRC" (https://identifiers.org/ensembl/ENSG00000197122)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/fccd4 "PPARA" (https://identifiers.org/ensembl/ENSG00000186951) and 
PPARA" (https://identifiers.org/ensembl/ENSG00000186951)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/ide30920ff "NR1I3" (https://identifiers.org/ensembl/ENSG00000143257) and 
NR1I3" (https://identifiers.org/ensembl/ENSG00000143257)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/idc5581697 "RXRA" (https://identifiers.org/ensembl/ENSG00000186350) and 
RXRA" (https://identifiers.org/ensembl/ENSG00000186350)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/idd3f66ad8 "RXRA" (https://identifiers.org/ensembl/ENSG00000186350) and 
RXRA" (https://identifiers.org/ensembl/ENSG00000186350)
http://classic.wikipathways.org/instance/WP2882_r126680 http://rdf.wikipathways.org/Pathway/WP2882_r126680/WP/Interaction/id9b3d5fd6 "NR1H3" (https://identifiers.org/ensembl/ENSG00000025434) and 
NR1H3" (https://identifiers.org/ensembl/ENSG00000025434)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations