wikipathways-collection

WikiPathways WP272

• WikiPathways: WP272 (classic)
• Species: Homo sapiens
• Scholia: WP272

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .. all OK!
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 28
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

Possible MIM translocation

Interactions between identical nodes: 28

http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/ad596 "Factor II" (https://identifiers.org/ensembl/ENSG00000180210) and 
Factor II" (https://identifiers.org/ensembl/ENSG00000180210)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/ad596 "Factor II" (https://identifiers.org/ensembl/ENSG00000180210) and 
Thrombin (II)" (https://identifiers.org/ensembl/ENSG00000180210)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/ad596 "Thrombin (II)" (https://identifiers.org/ensembl/ENSG00000180210) and 
Factor II" (https://identifiers.org/ensembl/ENSG00000180210)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/ad596 "Thrombin (II)" (https://identifiers.org/ensembl/ENSG00000180210) and 
Thrombin (II)" (https://identifiers.org/ensembl/ENSG00000180210)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/de3df "Factor VII" (https://identifiers.org/ensembl/ENSG00000057593) and 
Factor VII" (https://identifiers.org/ensembl/ENSG00000057593)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/de3df "Factor VII" (https://identifiers.org/ensembl/ENSG00000057593) and 
Factor VIIa" (https://identifiers.org/ensembl/ENSG00000057593)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/de3df "Factor VIIa" (https://identifiers.org/ensembl/ENSG00000057593) and 
Factor VII" (https://identifiers.org/ensembl/ENSG00000057593)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/de3df "Factor VIIa" (https://identifiers.org/ensembl/ENSG00000057593) and 
Factor VIIa" (https://identifiers.org/ensembl/ENSG00000057593)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/iddd2a9b8 "Plasmin" (https://identifiers.org/ensembl/ENSG00000122194) and 
Plasmin" (https://identifiers.org/ensembl/ENSG00000122194)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/iddd2a9b8 "Plasmin" (https://identifiers.org/ensembl/ENSG00000122194) and 
Plasminogen" (https://identifiers.org/ensembl/ENSG00000122194)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/iddd2a9b8 "Plasminogen" (https://identifiers.org/ensembl/ENSG00000122194) and 
Plasmin" (https://identifiers.org/ensembl/ENSG00000122194)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/iddd2a9b8 "Plasminogen" (https://identifiers.org/ensembl/ENSG00000122194) and 
Plasminogen" (https://identifiers.org/ensembl/ENSG00000122194)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/bac25 "Factor Va" (https://identifiers.org/ensembl/ENSG00000198734) and 
Factor Va" (https://identifiers.org/ensembl/ENSG00000198734)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/bac25 "Factor Va" (https://identifiers.org/ensembl/ENSG00000198734) and 
Factor V" (https://identifiers.org/ensembl/ENSG00000198734)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/bac25 "Factor V" (https://identifiers.org/ensembl/ENSG00000198734) and 
Factor Va" (https://identifiers.org/ensembl/ENSG00000198734)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/bac25 "Factor V" (https://identifiers.org/ensembl/ENSG00000198734) and 
Factor V" (https://identifiers.org/ensembl/ENSG00000198734)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/f0f42 "Factor XIa" (https://identifiers.org/ensembl/ENSG00000088926) and 
Factor XIa" (https://identifiers.org/ensembl/ENSG00000088926)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/f0f42 "Factor XIa" (https://identifiers.org/ensembl/ENSG00000088926) and 
Factor XI" (https://identifiers.org/ensembl/ENSG00000088926)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/f0f42 "Factor XI" (https://identifiers.org/ensembl/ENSG00000088926) and 
Factor XIa" (https://identifiers.org/ensembl/ENSG00000088926)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/f0f42 "Factor XI" (https://identifiers.org/ensembl/ENSG00000088926) and 
Factor XI" (https://identifiers.org/ensembl/ENSG00000088926)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/e95de "Factor IX" (https://identifiers.org/ensembl/ENSG00000101981) and 
Factor IX" (https://identifiers.org/ensembl/ENSG00000101981)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/e95de "Factor IX" (https://identifiers.org/ensembl/ENSG00000101981) and 
Factor IXa" (https://identifiers.org/ensembl/ENSG00000101981)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/e95de "Factor IXa" (https://identifiers.org/ensembl/ENSG00000101981) and 
Factor IX" (https://identifiers.org/ensembl/ENSG00000101981)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/e95de "Factor IXa" (https://identifiers.org/ensembl/ENSG00000101981) and 
Factor IXa" (https://identifiers.org/ensembl/ENSG00000101981)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/cc687 "Factor XIIIa" (https://identifiers.org/ensembl/ENSG00000143278) and 
Factor XIIIa" (https://identifiers.org/ensembl/ENSG00000143278)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/cc687 "Factor XIIIa" (https://identifiers.org/ensembl/ENSG00000143278) and 
Factor XIIIb" (https://identifiers.org/ensembl/ENSG00000143278)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/cc687 "Factor XIIIb" (https://identifiers.org/ensembl/ENSG00000143278) and 
Factor XIIIa" (https://identifiers.org/ensembl/ENSG00000143278)
http://classic.wikipathways.org/instance/WP272_r127712 http://rdf.wikipathways.org/Pathway/WP272_r127712/WP/Interaction/cc687 "Factor XIIIb" (https://identifiers.org/ensembl/ENSG00000143278) and 
Factor XIIIb" (https://identifiers.org/ensembl/ENSG00000143278)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations