wikipathways-collection

WikiPathways WP1982

• WikiPathways: WP1982 (classic)
• Species: Homo sapiens
• Scholia: WP1982

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 11
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests
  • deletedPathways: .. all OK!
  • linksToDeletedPathways: .. all OK!
  • linksToDeletedPathways_All: .. all OK!
  • speciesMismatch: .. all OK!
  • testRoundedRectangle: .. all OK!
  • youMustCite: .. all OK!
  • oldLicenses: .. all OK!
  • mediawikiLinks: .x we found 1 problem(s):
    • Pathways of which the description may contain MediaWiki-style links: 1
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 120
• Number of assertions: 241
• Number of fails: 2

Fails

Interactions with Labels

Interactions found that involve Labels: 11

• http://classic.wikipathways.org/instance/WP1982_r135870 “Cofactor” with graphId d705d
• http://classic.wikipathways.org/instance/WP1982_r135870 “Cholesterol efflux” with graphId f3aa7
• http://classic.wikipathways.org/instance/WP1982_r135870 “SRE” with graphId dbd64
• http://classic.wikipathways.org/instance/WP1982_r135870 “Cholesterol uptake” with graphId b6757
• http://classic.wikipathways.org/instance/WP1982_r135870 “Cofactor” with graphId cfeef
• http://classic.wikipathways.org/instance/WP1982_r135870 “Gene” with graphId d9356
• http://classic.wikipathways.org/instance/WP1982_r135870 “SRE” with graphId bc181
• http://classic.wikipathways.org/instance/WP1982_r135870 “Gene” with graphId ee1fa
• http://classic.wikipathways.org/instance/WP1982_r135870 “Fatty acid synthesis” with graphId d7664
• http://classic.wikipathways.org/instance/WP1982_r135870 “Cholesterol synthesis” with graphId b0f09
• http://classic.wikipathways.org/instance/WP1982_r135870 “Fatty acid degradation” with graphId ec5e9

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels

PathwayTests.mediawikiLinks

Pathways of which the description may contain MediaWiki-style links: 1

[["homepage"],
["http://classic.wikipathways.org/instance/WP1982_r135870"]
]