sr24-curation

WikiPathways WP4324

• WikiPathways: WP4324 (classic)
• Species: Homo sapiens
• Scholia: WP4324

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• CovidDiseaseMapsTests
  • interactionsWithoutReferences: .x we found 1 problem(s):
    • Interactions without literature references: 2
  • missingHGNC: .. all OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 5 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBMetabolitesTests: all 2 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• IEMPathwayTests: all 6 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 2
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 15 tests OK!

Summary

• Number of test classes: 23
• Number of tests: 140
• Number of assertions: 281
• Number of fails: 2

Fails

Interactions without references

Interactions without literature references: 2

• http://classic.wikipathways.org/instance/WP4324_r134817 -> http://rdf.wikipathways.org/Pathway/WP4324_r134817/WP/Interaction/id68061782
• http://classic.wikipathways.org/instance/WP4324_r134817 -> http://rdf.wikipathways.org/Pathway/WP4324_r134817/ComplexBinding/fb65b

More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences

Interactions with Labels

Interactions found that involve Labels: 2

• http://classic.wikipathways.org/instance/WP4324_r134817 “necessary to maintain normal MT-ND1 synthesis” with graphId eccc2
• http://classic.wikipathways.org/instance/WP4324_r134817 “COMPLEX 1” with graphId a51b9

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels