sr24-curation

WikiPathways WP430

• WikiPathways: WP430 (classic)
• Species: Homo sapiens
• Scholia: WP430

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• CovidDiseaseMapsTests
  • interactionsWithoutReferences: .x we found 1 problem(s):
    • Interactions without literature references: 52
  • missingHGNC: .. all OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 5 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBMetabolitesTests: all 2 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• IEMPathwayTests
  • allMetabolitesInteract: .x we found 1 problem(s):
    • Found metabolites without interaction: 1
  • metabolicConversions: .. all OK!
  • catalystsWithCommonDataSource: .. all OK!
  • metabolicConversionIdentifiersCommon: .. all OK!
  • diseasesHaveIdentifiers: .. all OK!
  • omimIdentifiers: .. all OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 15 tests OK!

Summary

• Number of test classes: 23
• Number of tests: 140
• Number of assertions: 281
• Number of fails: 2

Fails

Interactions without references

Interactions without literature references: 52

• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/iddf620e37
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id740045bc
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/d65e1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/d6e4f
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id54146f13_1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/ida0c8b2c0
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id27510544
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b3da5
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id90b15276
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/ba6c7
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id129bdce0
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b5c90
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/ComplexBinding/e12d0
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/f0964
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/f3edf
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id54146f13_2
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/f6437
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/d0da5_2
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b5913
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/bf2e7
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/ide4c980d3
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/d870f
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/idb248dd5c
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/d0da5_1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/a82d3
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id8b89268e
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/cd80c
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/f73d1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id4aefea78
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/e790f_1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id7a2680f1
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b2711
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b4769
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id561097a3
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/e0357
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/idb782318c
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id8f039aff
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/idba67fe43
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/e66f7
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id7e3de2b
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id3adcd55e
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/bb407
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id6a4e25b5
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/idb92332b0
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id2abec5f6
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id64bad4e5
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id208b4fc4
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/idf908f4d0
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/c1688
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/id5e009fa2
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/e790f_2
• http://classic.wikipathways.org/instance/WP430_r135479 -> http://rdf.wikipathways.org/Pathway/WP430_r135479/WP/Interaction/b1284

More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences

All metabolites are involved in interactions

Found metabolites without interaction: 1

• https://identifiers.org/wikipathways/WP430 has an metabolite not linked to an interaction: Statin

More details at https://www.wikipathways.org/WikiPathwaysCurator/IEMPathwayTests/allMetabolitesInteract