WikiPathways-SPARQL-book

list100DataNodes.rq

Code examples: curl

SPARQL

PREFIX dc:      <http://purl.org/dc/elements/1.1/> 
PREFIX wp:     <http://vocabularies.wikipathways.org/wp#>

SELECT DISTINCT ?node ?label
WHERE {
 ?node a wp:DataNode ;
     rdfs:label ?label .
} LIMIT 100

Execute or Edit

Output

node	label
http://identifiers.org/ncbigene/2678	GGT1
http://identifiers.org/cas/104987-11-3	Tacrolimus
http://identifiers.org/cas/104987-11-3	FK506
http://identifiers.org/cas/1053172-87-4	NC043
http://identifiers.org/cas/145-13-1	Pregnenolone
http://identifiers.org/cas/28319-77-9	Glycerophosphocholine
http://identifiers.org/cas/53-16-7	Estrone
http://identifiers.org/cas/53-43-0	DHA
http://identifiers.org/cas/53-43-0	dehydroepiandrosterone
http://identifiers.org/cas/57-83-0	Progesterone
http://identifiers.org/cas/57-91-0	Estradiol
http://identifiers.org/cas/58-22-0	Testosterone
http://identifiers.org/cas/59-56-3	Glucose-6-phosphate
http://identifiers.org/cas/59-56-3	glucose-6-phosphate
http://identifiers.org/cas/59-56-3	Glucose-1-phosphate
http://identifiers.org/cas/59-56-3	Glucose-6-Phosphate
http://identifiers.org/cas/59-56-3	glucose-1-phosphate
http://identifiers.org/cas/63-05-8	Androstenedione
http://identifiers.org/cas/64-19-7	Acetate
http://identifiers.org/cas/64-19-7	acetate
http://identifiers.org/cas/9001-31-4	Fibrin
http://identifiers.org/cas/9001-31-4	Fibrin monomer
http://identifiers.org/cas/9005-79-2	Glycogen
http://identifiers.org/cas/9005-79-2	Glycogen (n+1)
http://identifiers.org/chebi/CHEBI:1294	20a,22b-DHCHOL
http://identifiers.org/chebi/CHEBI:133021	venetoclax
http://identifiers.org/chebi/CHEBI:13956	Cer1P
http://identifiers.org/chebi/CHEBI:15681	GM3
http://identifiers.org/chebi/CHEBI:15745	2AMA
http://identifiers.org/chebi/CHEBI:15753	aKADA
http://identifiers.org/chebi/CHEBI:15753	2-Oxoadipic acid
http://identifiers.org/chebi/CHEBI:15999	HPPYRA
http://identifiers.org/chebi/CHEBI:16169	HGTA
http://identifiers.org/chebi/CHEBI:16169	Homogentisate
http://identifiers.org/chebi/CHEBI:16169	homogentisate
http://identifiers.org/chebi/CHEBI:16187	P2C
http://identifiers.org/chebi/CHEBI:16187	piperideine-2-carboxylate
http://identifiers.org/chebi/CHEBI:16330	DHTEST
http://identifiers.org/chebi/CHEBI:16330	Dihydrotestosterone
http://identifiers.org/chebi/CHEBI:16330	Dihydrotestosterone (DHT)
http://identifiers.org/chebi/CHEBI:16382	I-
http://identifiers.org/chebi/CHEBI:16393	SPG
http://identifiers.org/chebi/CHEBI:16422	ANDST
http://identifiers.org/chebi/CHEBI:16422	Androstenedione
http://identifiers.org/chebi/CHEBI:16422	androst-4-en-3,17-dione
http://identifiers.org/chebi/CHEBI:16422	androst-4-ene- 3,17-dione
http://identifiers.org/chebi/CHEBI:16485	18HCORST
http://identifiers.org/chebi/CHEBI:16485	18-hydroxycorticosterone
http://identifiers.org/chebi/CHEBI:16566	SPA
http://identifiers.org/chebi/CHEBI:16581	Pregnenolone
http://identifiers.org/chebi/CHEBI:16581	PREG
http://identifiers.org/chebi/CHEBI:16827	CORST
http://identifiers.org/chebi/CHEBI:16827	Corticosterone
http://identifiers.org/chebi/CHEBI:16851	PI(3,5)P2
http://identifiers.org/chebi/CHEBI:16886	2AM
http://identifiers.org/chebi/CHEBI:16893	SPAP
http://identifiers.org/chebi/CHEBI:16927	SACN
http://identifiers.org/chebi/CHEBI:16927	Saccharopine
http://identifiers.org/chebi/CHEBI:16962	COR
http://identifiers.org/chebi/CHEBI:16962	Cortisone
http://identifiers.org/chebi/CHEBI:17082	2AMA
http://identifiers.org/chebi/CHEBI:17105	4MAA
http://identifiers.org/chebi/CHEBI:17105	4-Maleylacetoacetate
http://identifiers.org/chebi/CHEBI:17252	17aHPROG
http://identifiers.org/chebi/CHEBI:17252	17-hydroxyprogesterone
http://identifiers.org/chebi/CHEBI:17263	E1
http://identifiers.org/chebi/CHEBI:17347	TEST
http://identifiers.org/chebi/CHEBI:17347	Testosterone
http://identifiers.org/chebi/CHEBI:17347	TES
http://identifiers.org/chebi/CHEBI:17380	3HKYN
http://identifiers.org/chebi/CHEBI:17380	3-Hydroxy- L-kynurenine
http://identifiers.org/chebi/CHEBI:17442	AP-DOBu
http://identifiers.org/chebi/CHEBI:17442	APDBA
http://identifiers.org/chebi/CHEBI:17600	HXAL
http://identifiers.org/chebi/CHEBI:17688	Nicotine
http://identifiers.org/chebi/CHEBI:17862	3-ketosphinganine
http://identifiers.org/chebi/CHEBI:17862	3-Dehydrosphinganine
http://identifiers.org/chebi/CHEBI:17998	ISCAL
http://identifiers.org/chebi/CHEBI:18005	kPPV
http://identifiers.org/chebi/CHEBI:18034	4FAA
http://identifiers.org/chebi/CHEBI:18163	GD1a
http://identifiers.org/chebi/CHEBI:18216	GM1a
http://identifiers.org/chebi/CHEBI:18216	ganglioside GM1
http://identifiers.org/chebi/CHEBI:18240	HPRO
http://identifiers.org/chebi/CHEBI:18258	T3
http://identifiers.org/chebi/CHEBI:18258	Triiodothyronine (T3)
http://identifiers.org/chebi/CHEBI:18323	Anserine
http://identifiers.org/chebi/CHEBI:18332	T4
http://identifiers.org/chebi/CHEBI:20680	qDHB
http://identifiers.org/chebi/CHEBI:2181	L-fucose
http://identifiers.org/chebi/CHEBI:24261	Glucocorticoids
http://identifiers.org/chebi/CHEBI:25513	neutral GSLs
http://identifiers.org/chebi/CHEBI:26537	Retinoids
http://identifiers.org/chebi/CHEBI:27731	GA2
http://identifiers.org/chebi/CHEBI:27938	GA1
http://identifiers.org/chebi/CHEBI:28058	GT1b
http://identifiers.org/chebi/CHEBI:28164	5,6beta-epoxy-cholesterol
http://identifiers.org/chebi/CHEBI:28304	Heparin
http://identifiers.org/chebi/CHEBI:28324	11-deoxycortisol
http://identifiers.org/chebi/CHEBI:28324	11DCORT

Code examples

curl

curl -o list100DataNodes.rq https://raw.githubusercontent.com/wikipathways/WikiPathways-SPARQL-book/master/sparql/list100DataNodes.rq
curl -H "Accept: text/tab-separated-values" -G http://sparql.wikipathways.org/ --data-urlencode [email protected]

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