Sandbox Pathway (Homo sapiens)

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Curation Tags

Description

This is just one test pathway with a variety of object types including datanodes which can be connected to database entries (double-click on them when in edit mode). Feel free to edit anything on this page.

Comments

BotTest 
20160501000001

Ontology Tags

 

Bibliography

  1. Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C; ''WikiPathways: pathway editing for the people.''; PLoS Biol, 2008 PubMed
  2. Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR; ''Mining biological pathways using WikiPathways web services.''; PLoS One, 2009 PubMed
  3. Kelder T, Conklin BR, Evelo CT, Pico AR; ''Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets.''; PLoS Biol, 2010 PubMed
  4. Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR; ''WikiPathways: building research communities on biological pathways.''; Nucleic Acids Res, 2012 PubMed

History

View all...
CompareRevisionActionTimeUserComment
91150view21:47, 11 January 2017KhanspersModified description
91149view21:08, 11 January 2017AlexanderPicoModified description
91115view01:21, 6 January 2017Kristina2Modified description
91114view01:15, 6 January 2017KhanspersModified description
91112view00:48, 6 January 2017AlexanderPicoModified description
91111view21:00, 5 January 2017AlexanderPicotesting new jnlp editor
90872view01:13, 15 December 2016AzanklPeriodical save, work in progress
90870view00:17, 15 December 2016AlexanderPicoReverted to version '05:51, 21 September 2016' by AlexanderPico
90869view23:24, 14 December 2016MaxgestinPeriodical save, work in progress
90868view23:14, 14 December 2016MaxgestinPeriodical save, work in progress
90867view23:04, 14 December 2016MaxgestinPeriodical save, work in progress
90866view22:53, 14 December 2016MaxgestinPeriodical save, work in progress
90865view22:43, 14 December 2016MaxgestinPeriodical save, work in progress
90864view22:33, 14 December 2016MaxgestinPeriodical save, work in progress
90863view22:23, 14 December 2016MaxgestinPeriodical save, work in progress
90861view22:12, 14 December 2016MaxgestinPeriodical save, work in progress
90860view22:02, 14 December 2016MaxgestinPeriodical save, work in progress
90859view21:52, 14 December 2016MaxgestinPeriodical save, work in progress
90858view21:42, 14 December 2016MaxgestinPeriodical save, work in progress
90857view21:32, 14 December 2016MaxgestinPeriodical save, work in progress
90806view17:47, 14 December 2016MaxgestinPeriodical save, work in progress
90805view17:37, 14 December 2016MaxgestinPeriodical save, work in progress
90796view17:06, 14 December 2016MaxgestinPeriodical save, work in progress
90795view16:56, 14 December 2016MaxgestinPeriodical save, work in progress
90794view14:46, 14 December 2016MaxgestinSpecify description
90793view14:44, 14 December 2016MaxgestinPeriodical save, work in progress
90792view14:34, 14 December 2016MaxgestinSpecify description
90791view14:32, 14 December 2016MaxgestinPeriodical save, work in progress
90790view14:20, 14 December 2016MaxgestinPeriodical save, work in progress
90789view14:10, 14 December 2016MaxgestinPeriodical save, work in progress
90788view14:00, 14 December 2016MaxgestinPeriodical save, work in progress
90787view13:50, 14 December 2016MaxgestinPeriodical save, work in progress
90786view13:40, 14 December 2016MaxgestinPeriodical save, work in progress
90501view16:36, 18 November 2016AndrewGNFOntology Term : 'immature T cell' added !
90500view16:35, 18 November 2016AndrewGNFOntology Term : 'citric acid cycle pathway' added !
90496view23:34, 17 November 2016BgoodOntology Term : 'classic metabolic pathway' added !
90495view23:33, 17 November 2016BgoodOntology Term : 'PW:0000026' removed !
90352view18:54, 7 November 2016AlexanderPicoOntology Term : 'altered metabolic pathway' added !
90351view20:34, 6 November 2016AlexanderPicoOntology Term : 'citric acid cycle pathway' added !
89622view14:39, 21 September 2016JmeliusOntology Term : 'PW:0000001' removed !
89621view14:39, 21 September 2016JmeliusOntology Term : 'Pathway Ontology' added !
89620view12:51, 21 September 2016MkutmonTest
89619view11:12, 21 September 2016Mkutmontest
89616view09:57, 21 September 2016Tina.test&
89615view09:56, 21 September 2016Tina.test&Modified description
89614view09:54, 21 September 2016Tina.test&test
89281view08:17, 30 August 2016Mkutmontest
88577view19:05, 11 August 2016Mkutmontest
88566view09:41, 11 August 2016FehrhartModified description
88153view13:34, 27 July 2016Mkutmontest

External references

Datanodes

View all...
NameTypeDatabase referenceComment
(1R,2R)-Isocitric acidMetabolite1234 (Entrez Gene)
ADPMetaboliteHMDB01508 (HMDB)
AKAPGeneProductENSG00000121057 (Ensembl)
ATPMetabolitetest (SWISS-MODEL)
BRCA1GeneProductENSG00000012048 (Ensembl)
CalciumMetaboliteHMDB00464 (HMDB) At least xx needed.
D-GlucoseMetaboliteundefined (SWISS-MODEL)
MIR338RnaENSG00000211563 (Ensembl)
MMP2GeneProductENSG00000087245 (Ensembl)
Substrate αMetaboliteundefined (SWISS-MODEL)
TCA CyclePathwayWP78 (WikiPathways)
TP53GeneProductENSG00000141510 (Ensembl)

Annotated Interactions

SourceTargetTypeDatabase referenceComment
BRCA1(1R,2R)-Isocitric acidmim-conversion10003 (Rhea)
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